RNA id: AMCG00002694


Basic Information

Item Value
RNA id AMCG00002694
length 432
RNA type mRNA
GC content 0.47
exon number 7
gene id AMCG00002694
representative False

Chromosome Information

Item Value
chromosome id CM030136.1
NCBI id CM030136.1
chromosome length 27394605
location 26613476 ~ 26664767 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ATGTCTCCTGGCTACATGACTCAAAGTACCTATCTTTCCATGTATGAGAAAAGGTATGGGCTGCCAGTGAACTTTCAGGCCATGCTGCTGCAGCCCAATAAGAAGACCATGAAGAAGCTGAGGGAGGTGCTGTATGATCTCTACAAACACCTAGACAGCAGTGCAGCCGCCATCATTGATAACAAATTTGTTGTTAGGgcCAAAGGCAGCAAGCTGGGAGTACAGTTCTTCATGCACTTATCATTCAGTATAGGTGCTTTAAAGGCGCCCCTGCTCCTCCGACTGAATCTCTCTCACATCAACCAGGAGCTGTCGCTGGACTCCACACACCAACTCTATATTGCCTCCTTCTGTATGCAGTTTCACCTGGAAAGCGATATCAGCGCTGCTCCATTTACAGCTTGTTCCTCAGTCCAAGCTTATGGCAAATaa

Function

GO:

id name namespace
GO:0033180 proton-transporting V-type ATPase, V1 domain cellular_component
GO:0015078 proton transmembrane transporter activity molecular_function

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU157020 lncRNA downstream 115026 26495949 ~ 26498450 (-) True G125269
TU156942 lncRNA downstream 333855 26275469 ~ 26279621 (-) True AMCG00002682
TU156922 lncRNA downstream 370945 26242254 ~ 26242531 (-) True G125200
TU156899 lncRNA downstream 407605 26204892 ~ 26205871 (-) True G125178
TU156879 lncRNA downstream 483014 26126554 ~ 26130462 (-) True G125160
TU157134 lncRNA upstream 248940 26913707 ~ 26915965 (-) True G125361
TU157152 lncRNA upstream 312917 26977684 ~ 26977920 (-) True G125376
TU157195 lncRNA upstream 467119 27131886 ~ 27197333 (-) True G125415
TU157256 lncRNA upstream 700695 27365462 ~ 27365663 (-) True G125473
TU157257 lncRNA upstream 703841 27368608 ~ 27368869 (-) True G125474
AMCG00002693 mRNA downstream 4724 26596131 ~ 26608752 (-) True AMCG00002693
AMCG00002686 mRNA downstream 161002 26395882 ~ 26452474 (-) True AMCG00002686
AMCG00002685 mRNA downstream 222494 26382511 ~ 26390982 (-) True AMCG00002685
AMCG00002690 mRNA downstream 237580 26363962 ~ 26375896 (-) True AMCG00002690
AMCG00002687 mRNA downstream 275319 26322898 ~ 26338157 (-) True AMCG00002687
AMCG00002708 mRNA upstream 157198 26821965 ~ 26831030 (-) True AMCG00002708
AMCG00002705 mRNA upstream 192602 26857369 ~ 26875008 (-) False AMCG00002705
AMCG00002707 mRNA upstream 398994 27063761 ~ 27099867 (-) True AMCG00002707
AMCG00002704 mRNA upstream 449438 27114205 ~ 27119264 (-) True AMCG00002704
AMCG00002709 mRNA upstream 476358 27141125 ~ 27141425 (-) True AMCG00002709
TU156949 other downstream 307553 26303882 ~ 26305923 (-) False AMCG00002688
TU156479 other downstream 2273910 24291787 ~ 24339566 (-) True G124848
TU156457 other downstream 2351653 24261565 ~ 24261823 (-) True G124829
TU156342 other downstream 3428308 23181921 ~ 23185168 (-) True AMCG00002629
TU156333 other downstream 3460312 23085994 ~ 23153164 (-) True G124719
TU157116 other upstream 190126 26854893 ~ 26875246 (-) True AMCG00002705

Expression Profile