RNA id: TU151073


Basic Information

Item Value
RNA id TU151073
length 291
lncRNA type inter_gene
GC content 0.64
exon number 1
gene id G120571
representative True

Chromosome Information

Item Value
chromosome id CM030136.1
NCBI id CM030136.1
chromosome length 27394605
location 1992607 ~ 1992897 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ggacgtgtctgaaattgtagggagtagccaactgatataatttggagcacccaagagtcttgggtgccgagttgccaatttgagaattgctggggggtgtaagggtgggccagaggctgctggaacaccTCAGGGATGGGGctgggtcccctcctaccacgagctgctgTGGGCTGCCGGGGGCCAGGGCAACGAGCCtaggggggcgcctgcctgccagtgagacgctggcggagattgacaggtgggcggggctgtgacctgggctgtggtccggcctgtggcctgggc

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU151027 lncRNA downstream 3980 1988369 ~ 1988627 (-) True G120533
TU151021 lncRNA downstream 17582 1932253 ~ 1975025 (-) True G120527
TU151001 lncRNA downstream 116546 1874213 ~ 1876061 (-) True G120513
TU150960 lncRNA downstream 464522 1467939 ~ 1528085 (-) True G120477
TU151074 lncRNA upstream 436 1993333 ~ 1993623 (-) True G120572
TU151075 lncRNA upstream 831 1993728 ~ 1994023 (-) True G120573
TU151076 lncRNA upstream 2871 1995768 ~ 1996067 (-) True G120574
TU151094 lncRNA upstream 169744 2162641 ~ 2162856 (-) True G120589
TU151109 lncRNA upstream 230446 2223343 ~ 2224405 (-) True G120601
AMCG00002049 mRNA downstream 171093 1818740 ~ 1821514 (-) True AMCG00002049
AMCG00002044 mRNA downstream 502040 1486604 ~ 1490567 (-) False AMCG00002044
AMCG00002042 mRNA downstream 544851 1441179 ~ 1447756 (-) True AMCG00002042
AMCG00002043 mRNA downstream 561923 1420067 ~ 1430684 (-) True AMCG00002043
AMCG00002037 mRNA downstream 614677 1373743 ~ 1377930 (-) True AMCG00002037
AMCG00002055 mRNA upstream 17576 2010473 ~ 2012433 (-) True AMCG00002055
AMCG00002057 mRNA upstream 92532 2085429 ~ 2119334 (-) True AMCG00002057
AMCG00002056 mRNA upstream 128444 2121341 ~ 2127768 (-) True AMCG00002056
AMCG00002058 mRNA upstream 168647 2161544 ~ 2161834 (-) True AMCG00002058
AMCG00002061 mRNA upstream 182583 2175480 ~ 2210300 (-) True AMCG00002061
TU151271 other upstream 928355 2921252 ~ 2923221 (-) False AMCG00002085
TU151301 other upstream 1002611 2995508 ~ 3004917 (-) True G120748
TU151364 other upstream 1120545 3113442 ~ 3127944 (-) True AMCG00002094
TU151499 other upstream 1720970 3713867 ~ 3716252 (-) True G120907
TU151529 other upstream 1791339 3784236 ~ 3786544 (-) True G120927

Expression Profile