RNA id: TU151109


Basic Information

Item Value
RNA id TU151109
length 316
lncRNA type inter_gene
GC content 0.37
exon number 2
gene id G120601
representative True

Chromosome Information

Item Value
chromosome id CM030136.1
NCBI id CM030136.1
chromosome length 27394605
location 2223343 ~ 2224405 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

TGAACCTCCTCCTTACAGCTGCTCGTAATAAATGTAGTGACCTTGCATTTGTCTGGATTATTTTCAACTCTTGAGACTGGTGTGGAGTAAAATAGAAATCATTTTGTGCTGCTGTGCTTTGTGTCCTGTGACCCTGGAAGTTTCTGCCTGACACAACACATCTGCAAACACTAAAAGAGCATACAACAATCCAGCTGttgacatctgccattatttggtaagtttaaagttttcaattttgtttatatgataGAATCAATTTGAAAAGTACTATGCAGGGTTTCCATGTGGATTCACTCTAAAATAAAGCTGATTG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU151094 lncRNA downstream 60487 2162641 ~ 2162856 (-) True G120589
TU151076 lncRNA downstream 227276 1995768 ~ 1996067 (-) True G120574
TU151075 lncRNA downstream 229320 1993728 ~ 1994023 (-) True G120573
TU151074 lncRNA downstream 229720 1993333 ~ 1993623 (-) True G120572
TU151073 lncRNA downstream 230446 1992607 ~ 1992897 (-) True G120571
TU151217 lncRNA upstream 471176 2695581 ~ 2695977 (-) True G120683
TU151216 lncRNA upstream 471658 2696063 ~ 2696387 (-) False G120683
TU151243 lncRNA upstream 620977 2845382 ~ 2847937 (-) True AMCG00002078
TU151291 lncRNA upstream 728868 2953273 ~ 2953482 (-) True G120743
TU151294 lncRNA upstream 761168 2985573 ~ 2986779 (-) True G120746
AMCG00002061 mRNA downstream 13043 2175480 ~ 2210300 (-) True AMCG00002061
AMCG00002058 mRNA downstream 61509 2161544 ~ 2161834 (-) True AMCG00002058
AMCG00002056 mRNA downstream 95575 2121341 ~ 2127768 (-) True AMCG00002056
AMCG00002057 mRNA downstream 104009 2085429 ~ 2119334 (-) True AMCG00002057
AMCG00002055 mRNA downstream 210910 2010473 ~ 2012433 (-) True AMCG00002055
AMCG00002063 mRNA upstream 16003 2240408 ~ 2243317 (-) True AMCG00002063
AMCG00002062 mRNA upstream 33406 2257811 ~ 2265536 (-) True AMCG00002062
AMCG00002064 mRNA upstream 58500 2282905 ~ 2295720 (-) True AMCG00002064
AMCG00002065 mRNA upstream 86389 2310794 ~ 2319970 (-) True AMCG00002065
AMCG00002066 mRNA upstream 243850 2468255 ~ 2468604 (-) True AMCG00002066
TU151271 other upstream 696847 2921252 ~ 2923221 (-) False AMCG00002085
TU151301 other upstream 771103 2995508 ~ 3004917 (-) True G120748
TU151364 other upstream 889037 3113442 ~ 3127944 (-) True AMCG00002094
TU151499 other upstream 1489462 3713867 ~ 3716252 (-) True G120907
TU151529 other upstream 1559831 3784236 ~ 3786544 (-) True G120927

Expression Profile