Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU151301 |
| length | 839 |
| RNA type | TUCP |
| GC content | 0.48 |
| exon number | 3 |
| gene id | G120748 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030136.1 |
| NCBI id | CM030136.1 |
| chromosome length | 27394605 |
| location | 2995508 ~ 3004917 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | name | namespace |
|---|---|---|
| GO:0009123 | nucleoside monophosphate metabolic process | biological_process |
| GO:0009124 | nucleoside monophosphate biosynthetic process | biological_process |
| GO:0009126 | purine nucleoside monophosphate metabolic process | biological_process |
| GO:0009127 | purine nucleoside monophosphate biosynthetic process | biological_process |
| GO:0009156 | ribonucleoside monophosphate biosynthetic process | biological_process |
| GO:0009161 | ribonucleoside monophosphate metabolic process | biological_process |
| GO:0009167 | purine ribonucleoside monophosphate metabolic process | biological_process |
| GO:0009168 | purine ribonucleoside monophosphate biosynthetic process | biological_process |
| id | description |
|---|---|
| ko00680 | Methane metabolism |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU151294 | lncRNA | downstream | 8729 | 2985573 ~ 2986779 (-) | True | G120746 |
| TU151291 | lncRNA | downstream | 42026 | 2953273 ~ 2953482 (-) | True | G120743 |
| TU151243 | lncRNA | downstream | 147571 | 2845382 ~ 2847937 (-) | True | AMCG00002078 |
| TU151216 | lncRNA | downstream | 299121 | 2696063 ~ 2696387 (-) | False | G120683 |
| TU151217 | lncRNA | downstream | 299531 | 2695581 ~ 2695977 (-) | True | G120683 |
| TU151314 | lncRNA | upstream | 3984 | 3008901 ~ 3020156 (-) | True | G120754 |
| TU151321 | lncRNA | upstream | 35631 | 3040548 ~ 3042500 (-) | True | G120760 |
| TU151354 | lncRNA | upstream | 86859 | 3091776 ~ 3092899 (-) | True | G120789 |
| TU151382 | lncRNA | upstream | 171667 | 3176584 ~ 3176844 (-) | False | AMCG00002091 |
| TU151407 | lncRNA | upstream | 402568 | 3407485 ~ 3466461 (-) | False | AMCG00002097 |
| AMCG00002083 | mRNA | downstream | 34250 | 2956881 ~ 2961258 (-) | True | AMCG00002083 |
| AMCG00002084 | mRNA | downstream | 49355 | 2935521 ~ 2946153 (-) | True | AMCG00002084 |
| AMCG00002085 | mRNA | downstream | 64490 | 2921788 ~ 2931018 (-) | True | AMCG00002085 |
| AMCG00002077 | mRNA | downstream | 123235 | 2861912 ~ 2872273 (-) | True | AMCG00002077 |
| AMCG00002079 | mRNA | downstream | 138381 | 2856058 ~ 2857127 (-) | True | AMCG00002079 |
| AMCG00002089 | mRNA | upstream | 38731 | 3043648 ~ 3066913 (-) | True | AMCG00002089 |
| AMCG00002090 | mRNA | upstream | 82627 | 3087544 ~ 3089884 (-) | True | AMCG00002090 |
| AMCG00002092 | mRNA | upstream | 90803 | 3095720 ~ 3110908 (-) | True | AMCG00002092 |
| AMCG00002094 | mRNA | upstream | 108560 | 3113477 ~ 3128440 (-) | False | AMCG00002094 |
| AMCG00002093 | mRNA | upstream | 129191 | 3134108 ~ 3146480 (-) | True | AMCG00002093 |
| TU151271 | other | downstream | 72287 | 2921252 ~ 2923221 (-) | False | AMCG00002085 |
| TU151364 | other | upstream | 108525 | 3113442 ~ 3127944 (-) | True | AMCG00002094 |
| TU151499 | other | upstream | 708950 | 3713867 ~ 3716252 (-) | True | G120907 |
| TU151529 | other | upstream | 779319 | 3784236 ~ 3786544 (-) | True | G120927 |
| TU151612 | other | upstream | 1209798 | 4214715 ~ 4219877 (-) | True | G120993 |
| TU152605 | other | upstream | 4831578 | 7836495 ~ 7839411 (-) | True | AMCG00002223 |
| species | RNA id | representative | length | rna type | GC content | exon number | chromosome id | location |
|---|---|---|---|---|---|---|---|---|
| eurasian perch (Perca fluviatilis) | TU70974 | True | 4141 | lncRNA | 0.45 | 4 | NC_053116.1 | 26071585 ~ 26076664 (+) |
