RNA id: TU152874


Basic Information

Item Value
RNA id TU152874
length 202
lncRNA type inter_gene
GC content 0.51
exon number 1
gene id G121935
representative True

Chromosome Information

Item Value
chromosome id CM030136.1
NCBI id CM030136.1
chromosome length 27394605
location 9018126 ~ 9018327 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

CAGGACTCTCCTGCAGGGGTCCCCAGTTATCTGTCATCGAAGCCCAGTTTCCAAGGATGAAACAACGGGCCAGACAGGAACATCCCCCTAACCCCCACGAGGCGCAGCGATATGTAGTCGTTTAAATACAGCTAGAGGAGGTTGCTGATTGCGGGTGCCATTGTGTCAGATAAAATGGACAAGCTCTAAACATTGCTCTGTG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU152845 lncRNA downstream 84963 8932163 ~ 8933163 (-) True G121912
TU152811 lncRNA downstream 147428 8868645 ~ 8870698 (-) True G121885
TU152800 lncRNA downstream 159123 8825431 ~ 8859003 (-) True G121875
TU152667 lncRNA downstream 1001051 8016064 ~ 8017075 (-) True G121789
TU152604 lncRNA downstream 1172810 7830193 ~ 7845316 (-) True G121754
TU152969 lncRNA upstream 120120 9138447 ~ 9213429 (-) True G122019
TU152989 lncRNA upstream 265642 9283969 ~ 9287587 (-) True G122037
TU153015 lncRNA upstream 593735 9612062 ~ 9614287 (-) False AMCG00002265
TU153025 lncRNA upstream 602701 9621028 ~ 9621472 (-) True G122061
TU153107 lncRNA upstream 739098 9757425 ~ 9775995 (-) False AMCG00002275
AMCG00002252 mRNA downstream 12239 8995702 ~ 9005887 (-) True AMCG00002252
AMCG00002251 mRNA downstream 35982 8957110 ~ 8982144 (-) True AMCG00002251
AMCG00002249 mRNA downstream 71939 8933969 ~ 8946187 (-) True AMCG00002249
AMCG00002247 mRNA downstream 114538 8898625 ~ 8903588 (-) True AMCG00002247
AMCG00002240 mRNA downstream 204535 8810319 ~ 8813591 (-) True AMCG00002240
AMCG00002248 mRNA upstream 280 9018607 ~ 9022271 (-) True AMCG00002248
AMCG00002250 mRNA upstream 36987 9055314 ~ 9061095 (-) True AMCG00002250
AMCG00002260 mRNA upstream 174872 9193199 ~ 9193429 (-) True AMCG00002260
AMCG00002259 mRNA upstream 182259 9200586 ~ 9208699 (-) True AMCG00002259
AMCG00002263 mRNA upstream 291089 9309416 ~ 9356970 (-) True AMCG00002263
TU152605 other downstream 1178715 7836495 ~ 7839411 (-) True AMCG00002223
TU151612 other downstream 4798249 4214715 ~ 4219877 (-) True G120993
TU151529 other downstream 5231582 3784236 ~ 3786544 (-) True G120927
TU151499 other downstream 5301874 3713867 ~ 3716252 (-) True G120907
TU151364 other downstream 5890182 3113442 ~ 3127944 (-) True AMCG00002094
TU153137 other upstream 813584 9831911 ~ 9833224 (-) True AMCG00002276
TU153139 other upstream 823768 9842095 ~ 9853075 (-) False AMCG00002279
TU153575 other upstream 2506566 11524893 ~ 11527355 (-) False AMCG00002317
TU153660 other upstream 2649428 11667755 ~ 11685089 (-) False AMCG00002327
TU153720 other upstream 2713290 11731617 ~ 11734324 (-) True G122597

Expression Profile