RNA id: TU155687



Basic Information


Item Value
RNA id TU155687
length 379
lncRNA type inter_gene
GC content 0.47
exon number 2
gene id G124175
representative True

Chromosome Information


Item Value
chromosome id CM030136.1
NCBI id CM030136.1
chromosome length 27394605
location 20302072 ~ 20334454 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


CTGTAGCGGGCATTGCCCACATGCAACACGGCTCCCTTTGTGATCGGCTGTAAAGCTGGGGTTGAAGTGCCGAGCTCTTACCTTGGCTTTCTGCAATGGGGTGAATCTCAAGTCGTGCACAAAGGGGTTCCGGAAGGGGGGAGCCAGATCCTGTTTCTCATCCCCATCTACTGCTGAGCACCGTCTGCTCCTTTTCGACAGCCTCATCCTCAGAGCTGGGATGGGATTTAATCATACAAAAAGCTGCGGCGCGTTTCTGCCCTGGTCTCCGCTACGCAGCTCGACCAATGCCCTTGCTTTCGGGAgctacgtttttattttttgttgtttttttatttatagtaatatgttttttttgttttttttttttttttctttt

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU155557 lncRNA downstream 1017779 19283878 ~ 19284293 (-) True G124068
TU155446 lncRNA downstream 1519706 18782145 ~ 18782366 (-) True G123981
TU155412 lncRNA downstream 1716142 18584709 ~ 18585930 (-) True G123961
TU155370 lncRNA downstream 1832465 18469234 ~ 18469607 (-) True G123926
TU155304 lncRNA downstream 2095940 18205668 ~ 18206132 (-) True G123876
TU155736 lncRNA upstream 205853 20540307 ~ 20540523 (-) True G124222
TU155844 lncRNA upstream 644643 20979097 ~ 21116735 (-) True G124327
TU155898 lncRNA upstream 1312601 21647055 ~ 21678545 (-) True AMCG00002584
TU155935 lncRNA upstream 1460319 21794773 ~ 21794988 (-) True G124402
TU155964 lncRNA upstream 1567211 21901665 ~ 21902223 (-) False AMCG00002596
AMCG00002579 mRNA downstream 27622 20269560 ~ 20274450 (-) True AMCG00002579
AMCG00002570 mRNA downstream 458455 19838384 ~ 19843617 (-) True AMCG00002570
AMCG00002569 mRNA downstream 758267 19522852 ~ 19543805 (-) True AMCG00002569
AMCG00002568 mRNA downstream 808801 19481866 ~ 19493271 (-) True AMCG00002568
AMCG00002566 mRNA downstream 898449 19394342 ~ 19403623 (-) True AMCG00002566
AMCG00002580 mRNA upstream 25103 20359557 ~ 20365199 (-) True AMCG00002580
AMCG00002578 mRNA upstream 171140 20505594 ~ 20512929 (-) True AMCG00002578
AMCG00002583 mRNA upstream 792660 21127114 ~ 21128253 (-) True AMCG00002583
AMCG00002586 mRNA upstream 1021478 21355932 ~ 21360543 (-) True AMCG00002586
AMCG00002585 mRNA upstream 1309906 21644360 ~ 21645046 (-) True AMCG00002585
TU155250 other downstream 2312607 17922452 ~ 17989465 (-) True G123829
TU154950 other downstream 3462350 16836156 ~ 16839722 (-) True G123585
TU154543 other downstream 5355761 14941260 ~ 14946311 (-) True G123263
TU154299 other downstream 6647836 13649228 ~ 13654236 (-) False AMCG00002421
TU154047 other downstream 7272666 13028197 ~ 13029406 (-) True G122862
TU156333 other upstream 2751540 23085994 ~ 23153164 (-) True G124719
TU156342 other upstream 2847467 23181921 ~ 23185168 (-) True AMCG00002629
TU156457 other upstream 3927111 24261565 ~ 24261823 (-) True G124829
TU156479 other upstream 3957333 24291787 ~ 24339566 (-) True G124848
TU156949 other upstream 5969428 26303882 ~ 26305923 (-) False AMCG00002688

Expression Profile