RNA id: TU155936



Basic Information


Item Value
RNA id TU155936
length 209
lncRNA type inter_gene
GC content 0.47
exon number 1
gene id G124403
representative True

Chromosome Information


Item Value
chromosome id CM030136.1
NCBI id CM030136.1
chromosome length 27394605
location 21794994 ~ 21795202 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


aaaaaaaagaggaacgGGGAGGCTGTAGGGTTGTGGATGAGGTGCAGAGAGCAAGTGGCTGATGTGGGGAAGCCAGCTAGCAGAGAGTTGAAGTCATATTAAAAAGGCCTGCAAAAGCAACTGAATAGACACTGTGGATATTACTTAGCAACACAGCAGGAACTCGATGAATTTTATCAAGCAGGATCTCACTGGAACCATCGTCCCGG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU155889 lncRNA upstream 140269 21653782 ~ 21654725 (+) True G124364
TU155851 lncRNA upstream 624640 21125015 ~ 21170354 (+) True G124331
TU155746 lncRNA upstream 1232731 20561622 ~ 20562263 (+) True G124232
TU155690 lncRNA upstream 1435299 20359323 ~ 20359695 (+) True G124178
TU155676 lncRNA upstream 1554115 20240585 ~ 20240879 (+) True G124165
TU155939 lncRNA downstream 113 21795315 ~ 21795957 (+) True G124405
TU155942 lncRNA downstream 10418 21805620 ~ 21810821 (+) True G124408
TU156041 lncRNA downstream 538747 22333949 ~ 22337958 (+) True G124494
TU156090 lncRNA downstream 641747 22436949 ~ 22438781 (+) True G124534
TU156156 lncRNA downstream 857524 22652726 ~ 22652942 (+) True G124590
AMCG00002588 mRNA upstream 52083 21699686 ~ 21742911 (+) True AMCG00002588
AMCG00002587 mRNA upstream 101469 21675071 ~ 21693525 (+) True AMCG00002587
AMCG00002582 mRNA upstream 724498 21054506 ~ 21070496 (+) True AMCG00002582
AMCG00002581 mRNA upstream 740838 21021936 ~ 21054156 (+) True AMCG00002581
AMCG00002577 mRNA upstream 926038 20687350 ~ 20868956 (+) True AMCG00002577
AMCG00002590 mRNA downstream 17376 21812578 ~ 21815488 (+) True AMCG00002590
AMCG00002598 mRNA downstream 355594 22150796 ~ 22156021 (+) True AMCG00002598
AMCG00002599 mRNA downstream 447075 22242277 ~ 22254740 (+) True AMCG00002599
AMCG00002601 mRNA downstream 470654 22265856 ~ 22269733 (+) True AMCG00002601
AMCG00002600 mRNA downstream 505820 22301022 ~ 22304978 (+) True AMCG00002600
TU155679 other upstream 1518739 20274089 ~ 20276255 (+) True AMCG00002573
TU155541 other upstream 2662636 19130403 ~ 19132358 (+) False AMCG00002561
TU155458 other upstream 2956463 18832014 ~ 18838531 (+) True G123989
TU155222 other upstream 3810264 17915436 ~ 17984730 (+) True G123807
TU154987 other upstream 4834912 16958161 ~ 16960082 (+) True AMCG00002500
TU156269 other downstream 1272922 23068124 ~ 23180043 (+) True AMCG00002623
TU156281 other downstream 1357446 23152648 ~ 23290535 (+) True G124689
TU156391 other downstream 1882733 23677935 ~ 23681385 (+) True G124769
TU156498 other downstream 2627050 24422252 ~ 24422613 (+) True G124863
TU156924 other downstream 4480389 26275591 ~ 26278973 (+) False AMCG00002684

Expression Profile