RNA id: TU156248


Basic Information

Item Value
RNA id TU156248
length 262
lncRNA type inter_gene
GC content 0.44
exon number 1
gene id G124667
representative True

Chromosome Information

Item Value
chromosome id CM030136.1
NCBI id CM030136.1
chromosome length 27394605
location 23002991 ~ 23003252 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

gtactgtggaaatgaaatgaaactcTCACCACAGCAACCACATGTTTCTCTCACAAATCCCATTATTTCGCACTCCTGgggcagagagaagagagagacacaagacAGGTAGCAATAGATCAACCAAAACCATGTGCTAAGGGTACAACCATTTCAAgggattttaattgaattgaacaaAACTCACAGTTAAACCAGAGGCTCCTCGGCTCCCAGGTGAACCCTAGGGCACATCaatggcaaattaaaaacacacccTACT

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU156247 lncRNA upstream 759 23001788 ~ 23002232 (+) True G124666
TU156237 lncRNA upstream 11231 22990571 ~ 22991760 (+) True G124658
TU156235 lncRNA upstream 12893 22987545 ~ 22990098 (+) True AMCG00002622
TU156236 lncRNA upstream 12893 22987545 ~ 22990098 (+) False AMCG00002622
TU156173 lncRNA upstream 90312 22859923 ~ 22912679 (+) True G124601
TU156249 lncRNA downstream 8183 23011435 ~ 23012000 (+) True G124668
TU156273 lncRNA downstream 215078 23218330 ~ 23276775 (+) True G124687
TU156357 lncRNA downstream 418721 23421973 ~ 23436320 (+) True G124740
TU156369 lncRNA downstream 603285 23606537 ~ 23606839 (+) True G124750
TU156392 lncRNA downstream 678761 23682013 ~ 23682226 (+) True G124770
AMCG00002621 mRNA upstream 3506 22996873 ~ 22999485 (+) True AMCG00002621
AMCG00002622 mRNA upstream 12827 22987622 ~ 22990164 (+) False AMCG00002622
AMCG00002613 mRNA upstream 51163 22947203 ~ 22951828 (+) True AMCG00002613
AMCG00002612 mRNA upstream 57070 22927289 ~ 22945921 (+) True AMCG00002612
AMCG00002618 mRNA upstream 96479 22904029 ~ 22906512 (+) True AMCG00002618
AMCG00002619 mRNA downstream 25384 23028636 ~ 23033585 (+) True AMCG00002619
AMCG00002624 mRNA downstream 40572 23043824 ~ 23055716 (+) True AMCG00002624
AMCG00002620 mRNA downstream 53530 23056782 ~ 23067800 (+) True AMCG00002620
AMCG00002623 mRNA downstream 65381 23068633 ~ 23073698 (+) False AMCG00002623
AMCG00002630 mRNA downstream 404314 23407566 ~ 23407966 (+) True AMCG00002630
TU155679 other upstream 2726736 20274089 ~ 20276255 (+) True AMCG00002573
TU155541 other upstream 3870633 19130403 ~ 19132358 (+) False AMCG00002561
TU155458 other upstream 4164460 18832014 ~ 18838531 (+) True G123989
TU155222 other upstream 5018261 17915436 ~ 17984730 (+) True G123807
TU154987 other upstream 6042909 16958161 ~ 16960082 (+) True AMCG00002500
TU156269 other downstream 64872 23068124 ~ 23180043 (+) True AMCG00002623
TU156281 other downstream 149396 23152648 ~ 23290535 (+) True G124689
TU156391 other downstream 674683 23677935 ~ 23681385 (+) True G124769
TU156498 other downstream 1419000 24422252 ~ 24422613 (+) True G124863
TU156924 other downstream 3272339 26275591 ~ 26278973 (+) False AMCG00002684

Expression Profile