RNA id: TU156369



Basic Information


Item Value
RNA id TU156369
length 303
lncRNA type inter_gene
GC content 0.56
exon number 1
gene id G124750
representative True

Chromosome Information


Item Value
chromosome id CM030136.1
NCBI id CM030136.1
chromosome length 27394605
location 23606537 ~ 23606839 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


tccaacgaggcacctcgtcccccaccatggaagtctgatgaggcacaacccatcccagaagcacctcaccacggagggtcaacggggcatccacacccaaggtttgacgagccatcgcaacccaaagcctgttgatggtccaaaccaaaccgagaggcctcctccagagggaagagcacagccagcagcaccgataaagaactttctgatctccttgctgctgtaataactatactgcctggaggggaggcaaccattaggcctaggccctaagccgtggacccccagagattcattttctcc

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU156357 lncRNA upstream 170217 23421973 ~ 23436320 (+) True G124740
TU156273 lncRNA upstream 329762 23218330 ~ 23276775 (+) True G124687
TU156249 lncRNA upstream 594537 23011435 ~ 23012000 (+) True G124668
TU156248 lncRNA upstream 603285 23002991 ~ 23003252 (+) True G124667
TU156247 lncRNA upstream 604305 23001788 ~ 23002232 (+) True G124666
TU156392 lncRNA downstream 75174 23682013 ~ 23682226 (+) True G124770
TU156396 lncRNA downstream 222831 23829670 ~ 23829984 (+) True G124774
TU156405 lncRNA downstream 380863 23987702 ~ 24004361 (+) True G124783
TU156445 lncRNA downstream 654709 24261548 ~ 24261841 (+) True G124823
TU156459 lncRNA downstream 671595 24278434 ~ 24278640 (+) True G124831
AMCG00002630 mRNA upstream 198571 23407566 ~ 23407966 (+) True AMCG00002630
AMCG00002623 mRNA upstream 532839 23068633 ~ 23073698 (+) False AMCG00002623
AMCG00002620 mRNA upstream 538737 23056782 ~ 23067800 (+) True AMCG00002620
AMCG00002624 mRNA upstream 550821 23043824 ~ 23055716 (+) True AMCG00002624
AMCG00002619 mRNA upstream 572952 23028636 ~ 23033585 (+) True AMCG00002619
AMCG00002631 mRNA downstream 46133 23652972 ~ 23677437 (+) True AMCG00002631
AMCG00002635 mRNA downstream 360739 23967578 ~ 23985386 (+) True AMCG00002635
AMCG00002637 mRNA downstream 390408 23997247 ~ 24007711 (+) True AMCG00002637
AMCG00002636 mRNA downstream 412665 24019504 ~ 24036531 (+) True AMCG00002636
AMCG00002642 mRNA downstream 763045 24369884 ~ 24376014 (+) True AMCG00002642
TU156281 other upstream 316002 23152648 ~ 23290535 (+) True G124689
TU156269 other upstream 426494 23068124 ~ 23180043 (+) True AMCG00002623
TU155679 other upstream 3330282 20274089 ~ 20276255 (+) True AMCG00002573
TU155541 other upstream 4474179 19130403 ~ 19132358 (+) False AMCG00002561
TU155458 other upstream 4768006 18832014 ~ 18838531 (+) True G123989
TU156391 other downstream 71096 23677935 ~ 23681385 (+) True G124769
TU156498 other downstream 815413 24422252 ~ 24422613 (+) True G124863
TU156924 other downstream 2668752 26275591 ~ 26278973 (+) False AMCG00002684
TU156956 other downstream 2755373 26362212 ~ 26369525 (+) True G125219

Expression Profile