RNA id: TU156386


Basic Information

Item Value
RNA id TU156386
length 291
lncRNA type inter_gene
GC content 0.46
exon number 4
gene id G124765
representative True

Chromosome Information

Item Value
chromosome id CM030136.1
NCBI id CM030136.1
chromosome length 27394605
location 23655984 ~ 23663572 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

TCTCAATCTTTGCTTCCTTTGTAAGGCGGTGAAGGTCATCAACCATTCTTCCGGTTGTTGACACTCCCCAGACTTTTTCCATTCCTGTAGTCTCGTTTTGCATCGCTCGTTTACTGAATCCCAGTCCAGCCCTGTCATATGTACACACTTGAGTTAACCGGGAAAGATCCTCCTGTATCTGAAACCACACATCCGAAGACATACCAGTAGGAGCATCCAGCATAACAACAGGCTGTCCTTGTCCTTTGCAGGTCAGATAGATCTTCTGACCCAAACCGATGTCTATTAACT

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU156319 lncRNA downstream 359869 23138618 ~ 23296115 (-) False G124719
TU156251 lncRNA downstream 656876 22996819 ~ 22999108 (-) True G124669
TU156157 lncRNA downstream 1002265 22653482 ~ 22653719 (-) True G124591
TU156148 lncRNA downstream 1057429 22597999 ~ 22598555 (-) True G124582
TU156091 lncRNA downstream 1217255 22436886 ~ 22438729 (-) True G124535
TU156401 lncRNA upstream 210106 23873678 ~ 23928150 (-) True G124779
TU156515 lncRNA upstream 747457 24411029 ~ 24411336 (-) True G124873
TU156550 lncRNA upstream 912593 24576165 ~ 24577131 (-) True G124907
TU156640 lncRNA upstream 1284578 24948150 ~ 24948841 (-) False G124975
TU156641 lncRNA upstream 1284578 24948150 ~ 24950358 (-) True G124975
AMCG00002632 mRNA downstream 184438 23421798 ~ 23471546 (-) True AMCG00002632
AMCG00002629 mRNA downstream 463328 23181931 ~ 23192656 (-) False AMCG00002629
AMCG00002625 mRNA downstream 619125 23033808 ~ 23036859 (-) True AMCG00002625
AMCG00002626 mRNA downstream 627637 23018946 ~ 23028347 (-) True AMCG00002626
AMCG00002627 mRNA downstream 643288 23000727 ~ 23012696 (-) True AMCG00002627
AMCG00002633 mRNA upstream 14370 23677942 ~ 23682594 (-) True AMCG00002633
AMCG00002634 mRNA upstream 114117 23777689 ~ 23787869 (-) True AMCG00002634
AMCG00002638 mRNA upstream 376769 24040341 ~ 24045879 (-) True AMCG00002638
AMCG00002639 mRNA upstream 388047 24051619 ~ 24065028 (-) True AMCG00002639
AMCG00002640 mRNA upstream 476988 24140560 ~ 24183507 (-) True AMCG00002640
TU156342 other downstream 470816 23181921 ~ 23185168 (-) True AMCG00002629
TU156333 other downstream 502820 23085994 ~ 23153164 (-) True G124719
TU155250 other downstream 5666519 17922452 ~ 17989465 (-) True G123829
TU154950 other downstream 6816262 16836156 ~ 16839722 (-) True G123585
TU154543 other downstream 8709673 14941260 ~ 14946311 (-) True G123263
TU156457 other upstream 597993 24261565 ~ 24261823 (-) True G124829
TU156479 other upstream 628215 24291787 ~ 24339566 (-) True G124848
TU156949 other upstream 2640310 26303882 ~ 26305923 (-) False AMCG00002688
TU157116 other upstream 3191321 26854893 ~ 26875246 (-) True AMCG00002705

Expression Profile