RNA id: TU156498



Basic Information


Item Value
RNA id TU156498
length 362
RNA type TUCP
GC content 0.40
exon number 1
gene id G124863
representative True

Chromosome Information


Item Value
chromosome id CM030136.1
NCBI id CM030136.1
chromosome length 27394605
location 24422252 ~ 24422613 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


tgtgaaagcatatgatatgatatacttagatttccaaaaagcttttgataaggttccacaccaaagactgatcctcaaattggaagctgtaggcattcagggtaatgtaagtagatggattatgaactggttgatgtataggaaacagagggtgtcgattagaggagttgcttctaactggagtgaggttgttagtggagttccacagggatcagtactagggcctttgctttttctaatctatattaatgaactggactctgggatagttagcaaacttgtcaaatttgcagacgatactaaaataggtggctcagcagatacaatcttggcagcacaggctattcagagggacttagata

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU156497 lncRNA upstream 10911 24411014 ~ 24411341 (+) True G124862
TU156495 lncRNA upstream 15274 24404476 ~ 24406978 (+) True G124860
TU156488 lncRNA upstream 29901 24387909 ~ 24392351 (+) True G124856
TU156490 lncRNA upstream 29901 24387909 ~ 24392351 (+) False G124856
TU156459 lncRNA upstream 143612 24278434 ~ 24278640 (+) True G124831
TU156551 lncRNA downstream 156729 24579342 ~ 24581696 (+) True G124908
TU156553 lncRNA downstream 184683 24607296 ~ 24607534 (+) True G124910
TU156570 lncRNA downstream 346905 24769518 ~ 24776815 (+) True AMCG00002650
TU156623 lncRNA downstream 522625 24945238 ~ 24963480 (+) True G124965
TU156671 lncRNA downstream 716367 25138980 ~ 25139272 (+) True G124999
AMCG00002642 mRNA upstream 46238 24369884 ~ 24376014 (+) True AMCG00002642
AMCG00002636 mRNA upstream 385721 24019504 ~ 24036531 (+) True AMCG00002636
AMCG00002637 mRNA upstream 414541 23997247 ~ 24007711 (+) True AMCG00002637
AMCG00002635 mRNA upstream 436866 23967578 ~ 23985386 (+) True AMCG00002635
AMCG00002631 mRNA upstream 744815 23652972 ~ 23677437 (+) True AMCG00002631
AMCG00002646 mRNA downstream 83680 24506293 ~ 24517840 (+) True AMCG00002646
AMCG00002649 mRNA downstream 254693 24677306 ~ 24679989 (+) True AMCG00002649
AMCG00002650 mRNA downstream 339271 24761884 ~ 24775578 (+) False AMCG00002650
AMCG00002657 mRNA downstream 516253 24938866 ~ 24949499 (+) True AMCG00002657
AMCG00002656 mRNA downstream 544374 24966987 ~ 24978576 (+) True AMCG00002656
TU156391 other upstream 740867 23677935 ~ 23681385 (+) True G124769
TU156281 other upstream 1131717 23152648 ~ 23290535 (+) True G124689
TU156269 other upstream 1242209 23068124 ~ 23180043 (+) True AMCG00002623
TU155679 other upstream 4145997 20274089 ~ 20276255 (+) True AMCG00002573
TU155541 other upstream 5289894 19130403 ~ 19132358 (+) False AMCG00002561
TU156924 other downstream 1852978 26275591 ~ 26278973 (+) False AMCG00002684
TU156956 other downstream 1939599 26362212 ~ 26369525 (+) True G125219

Expression Profile