RNA id: TU156515


Basic Information

Item Value
RNA id TU156515
length 308
lncRNA type inter_gene
GC content 0.41
exon number 1
gene id G124873
representative True

Chromosome Information

Item Value
chromosome id CM030136.1
NCBI id CM030136.1
chromosome length 27394605
location 24411029 ~ 24411336 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ctccaaggttgtgcacaaaatcttctttgtaagcagggtttccacaGTAATTACTTGAAGAtgaagtctttgaggaaagcagggccctgttcgttccaagggtcaagtttcttaagactcaaatagctatttaaatgactgacactttcgtattcagtcgacttagtcaattgtccagctgtaaaactccactgatcaggtgggcacaggcgggcagcacagtctgtaaagttctttatttaataaagtcctttaaaagaattcttcgtacggctcaatctccttctcccagtttaactcttctgttg

Function

GO:

id name namespace
GO:0048514 blood vessel morphogenesis biological_process
GO:0002040 sprouting angiogenesis biological_process
GO:0001525 angiogenesis biological_process

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU156401 lncRNA downstream 482879 23873678 ~ 23928150 (-) True G124779
TU156386 lncRNA downstream 747457 23655984 ~ 23663572 (-) True G124765
TU156319 lncRNA downstream 1114914 23138618 ~ 23296115 (-) False G124719
TU156251 lncRNA downstream 1411921 22996819 ~ 22999108 (-) True G124669
TU156157 lncRNA downstream 1757310 22653482 ~ 22653719 (-) True G124591
TU156550 lncRNA upstream 164829 24576165 ~ 24577131 (-) True G124907
TU156640 lncRNA upstream 536814 24948150 ~ 24948841 (-) False G124975
TU156641 lncRNA upstream 536814 24948150 ~ 24950358 (-) True G124975
TU156720 lncRNA upstream 963544 25374880 ~ 25433728 (-) True G125036
TU156719 lncRNA upstream 1006615 25417951 ~ 25433728 (-) False G125036
AMCG00002645 mRNA downstream 4049 24388134 ~ 24406980 (-) True AMCG00002645
AMCG00002643 mRNA downstream 24274 24377731 ~ 24386755 (-) True AMCG00002643
AMCG00002644 mRNA downstream 41247 24348880 ~ 24369782 (-) True AMCG00002644
AMCG00002641 mRNA downstream 199672 24195721 ~ 24211357 (-) True AMCG00002641
AMCG00002640 mRNA downstream 227522 24140560 ~ 24183507 (-) True AMCG00002640
AMCG00002647 mRNA upstream 275237 24686573 ~ 24687842 (-) True AMCG00002647
AMCG00002648 mRNA upstream 338873 24750209 ~ 24760885 (-) True AMCG00002648
AMCG00002651 mRNA upstream 364929 24776265 ~ 24786604 (-) True AMCG00002651
AMCG00002652 mRNA upstream 400020 24811356 ~ 24834198 (-) True AMCG00002652
AMCG00002654 mRNA upstream 473650 24884986 ~ 24916583 (-) True AMCG00002654
TU156479 other downstream 71463 24291787 ~ 24339566 (-) True G124848
TU156457 other downstream 149206 24261565 ~ 24261823 (-) True G124829
TU156342 other downstream 1225861 23181921 ~ 23185168 (-) True AMCG00002629
TU156333 other downstream 1257865 23085994 ~ 23153164 (-) True G124719
TU155250 other downstream 6421564 17922452 ~ 17989465 (-) True G123829
TU156949 other upstream 1892546 26303882 ~ 26305923 (-) False AMCG00002688
TU157116 other upstream 2443557 26854893 ~ 26875246 (-) True AMCG00002705

Expression Profile