RNA id: TU156640



Basic Information


Item Value
RNA id TU156640
length 410
lncRNA type inter_gene
GC content 0.48
exon number 2
gene id G124975
representative False

Chromosome Information


Item Value
chromosome id CM030136.1
NCBI id CM030136.1
chromosome length 27394605
location 24948150 ~ 24950358 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


CCATCTTCTTCGGCCTTCACTTCAATAAGGAAACCATTCCAGTCTACCCACCTGACTATGTTCCCATCAATACCATCTTTCTCCTTGCTGGACAAGTCTGTGACTGTGATTCTCTCAACCTCTGGCTCGTCCAAGCGAGATATCTTGTTCCCATTAAAGTTCTCCGTGGTGCGTTTGGGAGGCTGGGGTGGAGGAGAATATTCTGTGGCTGGTTCTTGGTCTTCTTTGGATAGCTCCTTCCACTGTTCTGAACAGAAGAGTCTCCCATGATGTACTTGGCACCCTCTATTACTGCCATATAGGAGAACCTCAGCTGGTCGGGAGTCTGGATGAGACCCATTCTGTACTTTCTCATGTCAAGTAAAATCTTCTTGATGTCCACAGAGGTCGGGTCTTTCCTCTTATCCATC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU156550 lncRNA downstream 371019 24576165 ~ 24577131 (-) True G124907
TU156515 lncRNA downstream 536814 24411029 ~ 24411336 (-) True G124873
TU156401 lncRNA downstream 1020000 23873678 ~ 23928150 (-) True G124779
TU156386 lncRNA downstream 1284578 23655984 ~ 23663572 (-) True G124765
TU156319 lncRNA downstream 1652035 23138618 ~ 23296115 (-) False G124719
TU156720 lncRNA upstream 426039 25374880 ~ 25433728 (-) True G125036
TU156719 lncRNA upstream 469110 25417951 ~ 25433728 (-) False G125036
TU156721 lncRNA upstream 482800 25431641 ~ 25433728 (-) False G125036
TU156717 lncRNA upstream 502374 25451215 ~ 25453998 (-) True G125035
TU156777 lncRNA upstream 661276 25610117 ~ 25612297 (-) True G125075
AMCG00002655 mRNA downstream 14399 24921106 ~ 24933751 (-) True AMCG00002655
AMCG00002654 mRNA downstream 31567 24884986 ~ 24916583 (-) True AMCG00002654
AMCG00002652 mRNA downstream 113952 24811356 ~ 24834198 (-) True AMCG00002652
AMCG00002651 mRNA downstream 161546 24776265 ~ 24786604 (-) True AMCG00002651
AMCG00002648 mRNA downstream 187265 24750209 ~ 24760885 (-) True AMCG00002648
AMCG00002653 mRNA upstream 14954 24963795 ~ 24966409 (-) True AMCG00002653
AMCG00002660 mRNA upstream 350860 25299701 ~ 25334662 (-) True AMCG00002660
AMCG00002665 mRNA upstream 624992 25573833 ~ 25603050 (-) True AMCG00002665
AMCG00002666 mRNA upstream 655326 25604167 ~ 25611494 (-) True AMCG00002666
AMCG00002671 mRNA upstream 698972 25647813 ~ 25676650 (-) True AMCG00002671
TU156479 other downstream 608584 24291787 ~ 24339566 (-) True G124848
TU156457 other downstream 686327 24261565 ~ 24261823 (-) True G124829
TU156342 other downstream 1762982 23181921 ~ 23185168 (-) True AMCG00002629
TU156333 other downstream 1794986 23085994 ~ 23153164 (-) True G124719
TU155250 other downstream 6958685 17922452 ~ 17989465 (-) True G123829
TU156949 other upstream 1355041 26303882 ~ 26305923 (-) False AMCG00002688
TU157116 other upstream 1906052 26854893 ~ 26875246 (-) True AMCG00002705

Expression Profile