Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU156777 |
| length | 814 |
| lncRNA type | sense_over |
| GC content | 0.39 |
| exon number | 4 |
| gene id | G125075 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030136.1 |
| NCBI id | CM030136.1 |
| chromosome length | 27394605 |
| location | 25610117 ~ 25612297 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | name | namespace |
|---|---|---|
| GO:0090304 | nucleic acid metabolic process | biological_process |
| GO:0006396 | RNA processing | biological_process |
| GO:0006139 | nucleobase-containing compound metabolic process | biological_process |
| GO:0007029 | endoplasmic reticulum organization | biological_process |
| GO:0006725 | cellular aromatic compound metabolic process | biological_process |
| GO:1901360 | organic cyclic compound metabolic process | biological_process |
| GO:0034641 | cellular nitrogen compound metabolic process | biological_process |
| GO:0046483 | heterocycle metabolic process | biological_process |
| GO:1990904 | ribonucleoprotein complex | cellular_component |
| GO:0044428 | obsolete nuclear part | cellular_component |
| GO:0032991 | protein-containing complex | cellular_component |
| GO:0043226 | organelle | cellular_component |
| GO:0043229 | intracellular organelle | cellular_component |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU156717 | lncRNA | downstream | 156119 | 25451215 ~ 25453998 (-) | True | G125035 |
| TU156720 | lncRNA | downstream | 176389 | 25374880 ~ 25433728 (-) | True | G125036 |
| TU156719 | lncRNA | downstream | 176389 | 25417951 ~ 25433728 (-) | False | G125036 |
| TU156721 | lncRNA | downstream | 176389 | 25431641 ~ 25433728 (-) | False | G125036 |
| TU156641 | lncRNA | downstream | 659759 | 24948150 ~ 24950358 (-) | True | G124975 |
| TU156879 | lncRNA | upstream | 514257 | 26126554 ~ 26130462 (-) | True | G125160 |
| TU156899 | lncRNA | upstream | 592595 | 26204892 ~ 26205871 (-) | True | G125178 |
| TU156922 | lncRNA | upstream | 629957 | 26242254 ~ 26242531 (-) | True | G125200 |
| TU156942 | lncRNA | upstream | 663172 | 26275469 ~ 26279621 (-) | True | AMCG00002682 |
| TU157020 | lncRNA | upstream | 883652 | 26495949 ~ 26498450 (-) | True | G125269 |
| AMCG00002665 | mRNA | downstream | 7067 | 25573833 ~ 25603050 (-) | True | AMCG00002665 |
| AMCG00002660 | mRNA | downstream | 275455 | 25299701 ~ 25334662 (-) | True | AMCG00002660 |
| AMCG00002653 | mRNA | downstream | 643708 | 24963795 ~ 24966409 (-) | True | AMCG00002653 |
| AMCG00002655 | mRNA | downstream | 676366 | 24921106 ~ 24933751 (-) | True | AMCG00002655 |
| AMCG00002654 | mRNA | downstream | 693534 | 24884986 ~ 24916583 (-) | True | AMCG00002654 |
| AMCG00002671 | mRNA | upstream | 35516 | 25647813 ~ 25676650 (-) | True | AMCG00002671 |
| AMCG00002670 | mRNA | upstream | 133786 | 25746083 ~ 25752614 (-) | True | AMCG00002670 |
| AMCG00002674 | mRNA | upstream | 176086 | 25788383 ~ 25822702 (-) | True | AMCG00002674 |
| AMCG00002672 | mRNA | upstream | 323905 | 25936202 ~ 25989563 (-) | True | AMCG00002672 |
| AMCG00002673 | mRNA | upstream | 390518 | 26002815 ~ 26005357 (-) | True | AMCG00002673 |
| TU156479 | other | downstream | 1270551 | 24291787 ~ 24339566 (-) | True | G124848 |
| TU156457 | other | downstream | 1348294 | 24261565 ~ 24261823 (-) | True | G124829 |
| TU156342 | other | downstream | 2424949 | 23181921 ~ 23185168 (-) | True | AMCG00002629 |
| TU156333 | other | downstream | 2456953 | 23085994 ~ 23153164 (-) | True | G124719 |
| TU155250 | other | downstream | 7620652 | 17922452 ~ 17989465 (-) | True | G123829 |
| TU156949 | other | upstream | 691585 | 26303882 ~ 26305923 (-) | False | AMCG00002688 |
| TU157116 | other | upstream | 1242596 | 26854893 ~ 26875246 (-) | True | AMCG00002705 |
