RNA id: TU156922



Basic Information


Item Value
RNA id TU156922
length 278
lncRNA type inter_gene
GC content 0.44
exon number 1
gene id G125200
representative True

Chromosome Information


Item Value
chromosome id CM030136.1
NCBI id CM030136.1
chromosome length 27394605
location 26242254 ~ 26242531 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


AAGACATCAGTGTAGAACGGGTGCTAGAACCTGGAGGCTGCCAGTTGGAAGTCTATATTCTGTGCAACTAGTTGGTTATTGACTTTGATTGCTGAACTCCATGGGGAGCTATACATGTGACTAAGTGATTTCCAAGGAGATTGACTTCCAGTGCACATGAGTTACCTATTGTTGTCTGGGAGCCTATTGGACTCTGGGTAACCAGGATGGCTTGGGTATATCTGCTCACATTGAAGCCCTTTAATTTACGTAGGTTTGAAAAACTGTTCCAATTGATG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU156899 lncRNA downstream 36383 26204892 ~ 26205871 (-) True G125178
TU156879 lncRNA downstream 111792 26126554 ~ 26130462 (-) True G125160
TU156777 lncRNA downstream 629957 25610117 ~ 25612297 (-) True G125075
TU156717 lncRNA downstream 788256 25451215 ~ 25453998 (-) True G125035
TU156719 lncRNA downstream 808526 25417951 ~ 25433728 (-) False G125036
TU156942 lncRNA upstream 32938 26275469 ~ 26279621 (-) True AMCG00002682
TU157020 lncRNA upstream 253418 26495949 ~ 26498450 (-) True G125269
TU157043 lncRNA upstream 411679 26654210 ~ 26654689 (-) True AMCG00002694
TU157045 lncRNA upstream 413097 26655628 ~ 26655871 (-) True G125291
TU157051 lncRNA upstream 419173 26661704 ~ 26663029 (-) True G125297
AMCG00002680 mRNA downstream 8211 26208270 ~ 26234043 (-) True AMCG00002680
AMCG00002681 mRNA downstream 103758 26136957 ~ 26138496 (-) True AMCG00002681
AMCG00002673 mRNA downstream 236897 26002815 ~ 26005357 (-) True AMCG00002673
AMCG00002672 mRNA downstream 252691 25936202 ~ 25989563 (-) True AMCG00002672
AMCG00002674 mRNA downstream 419552 25788383 ~ 25822702 (-) True AMCG00002674
AMCG00002679 mRNA upstream 156 26242687 ~ 26260306 (-) True AMCG00002679
AMCG00002682 mRNA upstream 24521 26267052 ~ 26275651 (-) False AMCG00002682
AMCG00002688 mRNA upstream 40809 26283340 ~ 26305661 (-) True AMCG00002688
AMCG00002689 mRNA upstream 75812 26318343 ~ 26319376 (-) True AMCG00002689
AMCG00002687 mRNA upstream 80367 26322898 ~ 26338157 (-) True AMCG00002687
TU156479 other downstream 1902688 24291787 ~ 24339566 (-) True G124848
TU156457 other downstream 1980431 24261565 ~ 24261823 (-) True G124829
TU156342 other downstream 3057086 23181921 ~ 23185168 (-) True AMCG00002629
TU156333 other downstream 3089090 23085994 ~ 23153164 (-) True G124719
TU155250 other downstream 8252789 17922452 ~ 17989465 (-) True G123829
TU156949 other upstream 61351 26303882 ~ 26305923 (-) False AMCG00002688
TU157116 other upstream 612362 26854893 ~ 26875246 (-) True AMCG00002705

Expression Profile