RNA id: TU157045



Basic Information


Item Value
RNA id TU157045
length 244
lncRNA type intronic
GC content 0.38
exon number 1
gene id G125291
representative True

Chromosome Information


Item Value
chromosome id CM030136.1
NCBI id CM030136.1
chromosome length 27394605
location 26655628 ~ 26655871 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


gatctcaaacCTATTGATATGTTGTGGGAGCATCTTGAacgtatggtacgtaagaagtgcccatcaagccaatccaacttgtgggaggtgcttcaagaagcatggggtgaaatctcttcagattacctcaacaaattgacagctagaatgccaaaggtctgcaaggctataattgctgcaaatggaagATTATTTGaagaaagcaaagtttgaaggacacaattattatttaaaaataaaaata

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU157043 lncRNA downstream 939 26654210 ~ 26654689 (-) True AMCG00002694
TU157020 lncRNA downstream 157178 26495949 ~ 26498450 (-) True G125269
TU156942 lncRNA downstream 376007 26275469 ~ 26279621 (-) True AMCG00002682
TU156922 lncRNA downstream 413097 26242254 ~ 26242531 (-) True G125200
TU156899 lncRNA downstream 449757 26204892 ~ 26205871 (-) True G125178
TU157051 lncRNA upstream 5833 26661704 ~ 26663029 (-) True G125297
TU157134 lncRNA upstream 257836 26913707 ~ 26915965 (-) True G125361
TU157152 lncRNA upstream 321813 26977684 ~ 26977920 (-) True G125376
TU157195 lncRNA upstream 476015 27131886 ~ 27197333 (-) True G125415
TU157256 lncRNA upstream 709591 27365462 ~ 27365663 (-) True G125473
AMCG00002693 mRNA downstream 46876 26596131 ~ 26608752 (-) True AMCG00002693
AMCG00002686 mRNA downstream 203154 26395882 ~ 26452474 (-) True AMCG00002686
AMCG00002685 mRNA downstream 264646 26382511 ~ 26390982 (-) True AMCG00002685
AMCG00002690 mRNA downstream 279732 26363962 ~ 26375896 (-) True AMCG00002690
AMCG00002687 mRNA downstream 317471 26322898 ~ 26338157 (-) True AMCG00002687
AMCG00002708 mRNA upstream 166094 26821965 ~ 26831030 (-) True AMCG00002708
AMCG00002705 mRNA upstream 201498 26857369 ~ 26875008 (-) False AMCG00002705
AMCG00002707 mRNA upstream 407890 27063761 ~ 27099867 (-) True AMCG00002707
AMCG00002704 mRNA upstream 458334 27114205 ~ 27119264 (-) True AMCG00002704
AMCG00002709 mRNA upstream 485254 27141125 ~ 27141425 (-) True AMCG00002709
TU156949 other downstream 349705 26303882 ~ 26305923 (-) False AMCG00002688
TU156479 other downstream 2316062 24291787 ~ 24339566 (-) True G124848
TU156457 other downstream 2393805 24261565 ~ 24261823 (-) True G124829
TU156342 other downstream 3470460 23181921 ~ 23185168 (-) True AMCG00002629
TU156333 other downstream 3502464 23085994 ~ 23153164 (-) True G124719
TU157116 other upstream 199022 26854893 ~ 26875246 (-) True AMCG00002705

Expression Profile