RNA id: TU157134


Basic Information

Item Value
RNA id TU157134
length 725
lncRNA type inter_gene
GC content 0.36
exon number 2
gene id G125361
representative True

Chromosome Information

Item Value
chromosome id CM030136.1
NCBI id CM030136.1
chromosome length 27394605
location 26913707 ~ 26915965 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

AACTTGAAAAGCCATGCTGTTACTATGTTTGAAGTGGGGAAGCTTTCAGATGAATCCCTAGATAGTTTCTTGTTGGAACTTGAAAAGgTTGAAAGCACTGCAGAAGGAGAAGCTCAAAGATATTTTGACCATGCACTGACTCTCAGAAATACAATACTGTTTCTACGATACAACAAGGACCTGACTTCAGACCCTGAGCAGCCAAACAATGGTAATCAATGCTGAAAGCTTCTGTTTAACAAAGTTGCTGCTAACGGCAAAAGTCTTCTTTGGTGATGGTCAAACATATGTGTATCATTTATTTACTCTACtactctactactactatttacTCCCCTGCTTGATGTTATGTTGGCTTGCATACTGTGTTATGCTGCCCATGTGCTGTGTTCAGAAGACCTCTCTTCCCTACAGCAGGGATTGAGTCCTCTGCATTCAGTGTACTGTTTTGTACTATACATCTATTTTGTATTGAGGATAGCTTTGTGCTGTGATAAAATGTTGTAGGTGCCAACAAAAGGCAAACTTGGAACTTTTGCGGTTCAGAACACATCatccaaagaaagaaatggtACCTTGAATAGTGCTAAATTAGCATTGGTaacattactgttattttatatttgagttTTATTGATACATccataaaaaatactttcatatattctaaaaaaaaaaaaagtcatcaTGTTctgtagtatttgttttattgtttaattacacat

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU157051 lncRNA downstream 250678 26661704 ~ 26663029 (-) True G125297
TU157045 lncRNA downstream 257836 26655628 ~ 26655871 (-) True G125291
TU157043 lncRNA downstream 259018 26654210 ~ 26654689 (-) True AMCG00002694
TU157020 lncRNA downstream 415257 26495949 ~ 26498450 (-) True G125269
TU156942 lncRNA downstream 634086 26275469 ~ 26279621 (-) True AMCG00002682
TU157152 lncRNA upstream 61719 26977684 ~ 26977920 (-) True G125376
TU157195 lncRNA upstream 215921 27131886 ~ 27197333 (-) True G125415
TU157256 lncRNA upstream 449497 27365462 ~ 27365663 (-) True G125473
TU157257 lncRNA upstream 452643 27368608 ~ 27368869 (-) True G125474
TU157258 lncRNA upstream 454629 27370594 ~ 27370875 (-) True G125475
AMCG00002705 mRNA downstream 38699 26857369 ~ 26875008 (-) False AMCG00002705
AMCG00002708 mRNA downstream 82677 26821965 ~ 26831030 (-) True AMCG00002708
AMCG00002694 mRNA downstream 248940 26613476 ~ 26664767 (-) False AMCG00002694
AMCG00002693 mRNA downstream 304955 26596131 ~ 26608752 (-) True AMCG00002693
AMCG00002686 mRNA downstream 461233 26395882 ~ 26452474 (-) True AMCG00002686
AMCG00002707 mRNA upstream 147796 27063761 ~ 27099867 (-) True AMCG00002707
AMCG00002704 mRNA upstream 198240 27114205 ~ 27119264 (-) True AMCG00002704
AMCG00002709 mRNA upstream 225160 27141125 ~ 27141425 (-) True AMCG00002709
AMCG00002706 mRNA upstream 324371 27240336 ~ 27244422 (-) True AMCG00002706
TU157116 other downstream 38461 26854893 ~ 26875246 (-) True AMCG00002705
TU156949 other downstream 607784 26303882 ~ 26305923 (-) False AMCG00002688
TU156479 other downstream 2574141 24291787 ~ 24339566 (-) True G124848
TU156457 other downstream 2651884 24261565 ~ 24261823 (-) True G124829
TU156342 other downstream 3728539 23181921 ~ 23185168 (-) True AMCG00002629

Expression Profile