RNA id: TU157258


Basic Information

Item Value
RNA id TU157258
length 282
lncRNA type inter_gene
GC content 0.41
exon number 1
gene id G125475
representative True

Chromosome Information

Item Value
chromosome id CM030136.1
NCBI id CM030136.1
chromosome length 27394605
location 27370594 ~ 27370875 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

tgaatacatagataaccagatactccaggaaattaaaggtgtggtcatttggtagctgtgagttccacaatgaagagtttttgaAATCCCCAGATATAAGATCTCTAAATACAAGGTGTAGGTAAGAAAtgaactattgatcagttcaatctggctttgggaacagttcttctgaacctgtaccggtgtagattggacttcaataggaggaagtgacacaataaagacatatatGAACCGCGCAGGCGGACAGTCTTAGTGCCCACGCAGGCTATTCATTGG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU157257 lncRNA downstream 1725 27368608 ~ 27368869 (-) True G125474
TU157256 lncRNA downstream 4931 27365462 ~ 27365663 (-) True G125473
TU157195 lncRNA downstream 173261 27131886 ~ 27197333 (-) True G125415
TU157152 lncRNA downstream 392674 26977684 ~ 26977920 (-) True G125376
TU157134 lncRNA downstream 454629 26913707 ~ 26915965 (-) True G125361
AMCG00002706 mRNA downstream 126172 27240336 ~ 27244422 (-) True AMCG00002706
AMCG00002709 mRNA downstream 229169 27141125 ~ 27141425 (-) True AMCG00002709
AMCG00002704 mRNA downstream 251330 27114205 ~ 27119264 (-) True AMCG00002704
AMCG00002707 mRNA downstream 270727 27063761 ~ 27099867 (-) True AMCG00002707
AMCG00002705 mRNA downstream 495586 26857369 ~ 26875008 (-) False AMCG00002705
TU157116 other downstream 495348 26854893 ~ 26875246 (-) True AMCG00002705
TU156949 other downstream 1064671 26303882 ~ 26305923 (-) False AMCG00002688
TU156479 other downstream 3031028 24291787 ~ 24339566 (-) True G124848
TU156457 other downstream 3108771 24261565 ~ 24261823 (-) True G124829
TU156342 other downstream 4185426 23181921 ~ 23185168 (-) True AMCG00002629

Expression Profile