RNA id: AMCG00002721


Basic Information

Item Value
RNA id AMCG00002721
length 1948
RNA type mRNA
GC content 0.63
exon number 8
gene id AMCG00002721
representative True

Chromosome Information

Item Value
chromosome id CM030139.1
NCBI id CM030139.1
chromosome length 23121578
location 128714 ~ 136700 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ATGCGCACTGTGTTGGGCGCTATACAGTCCGCTGTTTCTGTAGGACTGCACCCCTGTCATGTGACTGTGGCGTGGCTCGGCGCTCGGCTGGCCGTGCCTGGCGGCGCTCTGTGCGCCACTGCGCTGGCTGGCGGTGTAGTCAGGAAATTGAAGGCACGGCGGAGAGCAGTGCGCAGCCCCGGCTCTTACTCTGTCTCTGTGGGCGGACAGGAGCACACCCCGGCTCCGGTGAGAGGCGCCGCCGGACAGAAAACCCTCCGTGCTCCGCCCTGTCCTGTCCACGGACTCACTCCATACCCCCCAGTGAGGATGGAGGGGCCAGATTCCCTGCAGACCAGTCTGAATGCCTCCTACCTGCCGGCCCTCCAGCCTCAGCCCGAGGACGAGGAGCCCCTGCTGCCCGGCGACCCTGTGGCCGACCCCAGGCTCCCCGGGGGCCACCGGCCCCACGACTCCTACAGCCTGGTCTACTGCATCTTCTTCCTGCTGGGCATCGGCTCCCTGCTGCCGTGGAACTTCTTCATCACGGCCAAACACTACTGGCTGTACAAGCTGAGCAACGGCTCCGAGCCGAACTCTGGACACAGCCCGACCTCGGACCTGAGCGATTACTTTGAGAGCTATCTGGCCATCGCCTCCACCGTGCCCTCAGTGCTCTGCCTGGTGCTCAACTACGTCCTCGTCAACAAGGTGTCTCCAGCCGTGCGCGTCTACAGCTCCCTGGCGGTCATCCTGCTGGTGTTCGTGCTCACCACGGCGCTGGTGAAGGTGGACACGGGGGGCCGGCGAGAGGAGTTCTTTGCTGCCACGCTGGTGAGCGTGGCTGTGGTCAGCGGGGCGTCCAACGTGTTCACAGGCAGCGTGTTCGGAGTGACCGGCCGCTTCCCCATGCGGATCTCACAAGCACTCATCTCTGGTGCCAGTGTGCCCCTCCATGGAGCCCCACTGTCTGCCATCCTGCAaggcCAGGCCATGGGTGGCACCCTCAGCGCCGTGGCGTCGGTCATTGACCTGGCCGCTGCCCATGATGTCACAGACAGTGCGCTGGCGTACTTCCTGACTGCGGACGTCTTCATAGTGCTGTGCATTGGCATGTACTTGCTGCTGCCCCACCTGCACTACTCCagGTACTACATGCTGGCTCCTCCTGGTGGGGGTGCAGACGGGGAGCAGCTGGCCGGGGGGACGGTGCCGCCGCTGCGGCCCATCCTGAAGAAGACGGCGGTGCTGGGGCTGTGCGTGTTCTACGTGTTCTTCGTCTCCATTGTGGTGTTCCCGGCCGTGTCCTCGGGCATCCAGTCCGTGCACCGGGACTCGGGCAGCCCCTGGACGGGCAAGTACTTTGTGCCGCTGACCAGCTTCCTGCTGTACAACATGGCGGACTTCTGCGGCCGGCAGGCCACGGCATGGGTCCAGGCCCCGGGGCCACGGAGCCGCCTGTTGCCGGTGCTGGTGCTGCTGCGTACGCTGCTCGTGCCGCTCTTCGTGTTCTGCAACTACCAGCCGCGTGGGCGGCTTCACACCGTGCTGTTCGCCCAGGATGCCTATCCCGTGGTCTTCATCTCCCTGCTGGGCCTCAGCAACGGCTACCTGGGCACCTTGCCCATGATCTACGGGCCTAAGGTGGTGCCGCGCGAGCTGGCCGAGCCAGCCGGGGTCCTCATGTCCTTCTTCCTCACACTGGGGCTGGCCACCGGCTCGGCCTTCTCTGTCCTCCTCGTGCACTGCATCTGAGGACCGTGCGCACAGGTGGCAGGGGGCTGGCGTTGGGACGCAGCGCACGACTGTGTGTTGATGGTTTTAACAGCGACTGAAGTAATCAAGcaattactgtttttaaaaactgttttattctgtgaaCTCCCACAATGCCCTGCTAAAGCAGCCCTGAGAGGCAGCAGGAGGAGCTCAGGGAGAGacgttttataaaataaataatgatcgAGAG

Function

GO: NA

KEGG:

id description
K15014 SLC29A1_2_3, ENT1_2_3; solute carrier family 29 (equilibrative nucleoside transporter), member 1/2/3

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU173885 lncRNA downstream 10956 147656 ~ 147874 (+) True G138246
TU173939 lncRNA downstream 149851 286551 ~ 286827 (+) True G138293
TU173980 lncRNA downstream 291088 427788 ~ 428114 (+) True G138321
TU173981 lncRNA downstream 341536 478236 ~ 478456 (+) True G138322
TU173982 lncRNA downstream 346524 483224 ~ 483602 (+) True G138323
AMCG00002722 mRNA upstream 5950 110925 ~ 122764 (+) True AMCG00002722
AMCG00002720 mRNA downstream 827 137527 ~ 146700 (+) True AMCG00002720
AMCG00002723 mRNA downstream 29168 165868 ~ 184681 (+) True AMCG00002723
AMCG00002726 mRNA downstream 126621 263321 ~ 276791 (+) True AMCG00002726
AMCG00002729 mRNA downstream 165050 301750 ~ 302264 (+) True AMCG00002729
AMCG00002730 mRNA downstream 214064 350764 ~ 382430 (+) True AMCG00002730
TU174062 other downstream 758128 894828 ~ 898423 (+) True G138387
TU174076 other downstream 774410 911110 ~ 913532 (+) True G138394
TU174081 other downstream 789769 926469 ~ 927621 (+) False AMCG00002748
TU174083 other downstream 789769 926469 ~ 930598 (+) True AMCG00002748
TU174180 other downstream 952578 1089278 ~ 1092952 (+) True AMCG00002757

Expression Profile