RNA id: AMCG00002750


Basic Information

Item Value
RNA id AMCG00002750
length 1440
RNA type mRNA
GC content 0.60
exon number 4
gene id AMCG00002750
representative True

Chromosome Information

Item Value
chromosome id CM030139.1
NCBI id CM030139.1
chromosome length 23121578
location 904455 ~ 907446 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

GGGGGAAAGACTGTAAGAGGCAGTGCGCTGTGCGATCCGCTCActcgctctctcactctgccAGAGGACTGCTCCTGCCCCGCACTGCTGCCCCGCGCTCCTCTCTGCCTGCCGGACCCCCGAGCTGCACTCTGTCTGGGCCCCCAGCCGCTGGACCCCTCAGCCCTCTTAAACAAACCCCCTCTGTGCTGCCCTCGCCAtgctgcccccccgccccgcccTGCTCCTCCTGCTCTGTCTCGGGCTGCGGCCGACCGCCGGCCAGGACACGGAGGCCCCCCCCGCGCCCGCCACGGTGCCCAACGACACAGAGACGGAGGACGGCTGGGGCATCGAATCGATCCGCGACAGCTTCCAGGCGGTGAACGGCTACTTCGACTCGGTGCTGGAGCTGATGGGCGGCCGCAACGGCGTGTGCCAGTACCGCTGCCGATACGggAAGGCGCCTCTTCCTCGCCCGGAATACAAGACCCCAGAGCCCAACGGCTGTAGCTCGTACTTCCTGGGCCTGCAGGTACCAGACAGTCTGGACCTGTGCTACGACACCTGCGGCTCCAACAAGTACCGCTGCGACTCCAAGTTCCGCTGGTGTCTCCATGGCATCTGCAGCGACCTCAAGAAGAGCCTGGGCTTCGTGTCAAAGGTCGAAGCCTGCGAGACCGTGGCCGACACGCTGTTCAACACCGTGTGGACTCTGGGCTGCCGGCCCTTCATGAACAGCCAGAGGGCCGCCTGCATCTGCAAcgaggaggagaaggaagagcTGTAGGGCGACGCCAGAGAAGCCCCCGCCCAAGCCCGGCGCAGCCCCCCGACACCACACAGCACCCCTCGCCAGgacacacaactacacaccaCGACAGACCCTTAGCACCCAGCACAGTCCATTACACACCAGCACAGATCTCTACCGGCTGATACACATCGATGAGGAACACGCGGACCAGGACATACGGCAGCAAAACACGCCAGAACCGACCCACCGGGCTTCGGCGTGTGTGACGGTGAGGTGGCTGCCGTTTCCCTACCACAGCTTCACAGAGCGCCCGGCTGCCTCGTCAACACAGAGGGAACCACACAGACGAGACTGACACAACTACACAAGCGACACTAAACGAGGCTACCTGTACAATCGTGGGACGAGGATTCTGCCCCCGAGCCCAGACTCCCAGTGACTGTTCgtctgccccccccaccacacgcTGTATTTATTGCCGTCGCGCCTCTGGCCGGCACACAAGGACACGCTGTGGTTGAGGTTGTACGGTTAATGGTATTATCATCACTTCTGATTGGCTGTGATATTTAGGATGTATTTAAGttattgaatgtgtgtttgttcgtTTGCATGTTTTCCAATCCTGCTCAGAATCACCGGCAGGGTTTTCTGTCTgctcttgtttttttggttgcaaataaaatgaaagaaatgaacaaaaa

Function

GO: NA

KEGG:

id description
K01047 PLA2G, SPLA2; secretory phospholipase A2

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU174126 lncRNA downstream 6038 895012 ~ 898417 (-) False G138430
TU174128 lncRNA downstream 6038 895012 ~ 898417 (-) True G138430
TU174129 lncRNA downstream 6038 895012 ~ 898417 (-) False G138430
TU174099 lncRNA downstream 97397 805760 ~ 807058 (-) False AMCG00002743
TU174037 lncRNA downstream 99300 803573 ~ 805155 (-) True G138373
TU174258 lncRNA upstream 582116 1489562 ~ 1518053 (-) True G138535
TU174285 lncRNA upstream 1025914 1933360 ~ 1933995 (-) True G138559
TU174334 lncRNA upstream 1176452 2083898 ~ 2084097 (-) True G138594
TU174435 lncRNA upstream 1594667 2502113 ~ 2502314 (-) True G138678
TU174481 lncRNA upstream 1783984 2691430 ~ 2691869 (-) True G138720
AMCG00002744 mRNA downstream 50725 846563 ~ 853730 (-) True AMCG00002744
AMCG00002745 mRNA downstream 60735 841258 ~ 843720 (-) True AMCG00002745
AMCG00002742 mRNA downstream 75286 828807 ~ 829169 (-) True AMCG00002742
AMCG00002743 mRNA downstream 87694 806818 ~ 816761 (-) True AMCG00002743
AMCG00002738 mRNA downstream 135632 763129 ~ 768823 (-) True AMCG00002738
AMCG00002751 mRNA upstream 3279 910725 ~ 919475 (-) True AMCG00002751
AMCG00002752 mRNA upstream 13342 920788 ~ 923672 (-) False AMCG00002752
AMCG00002749 mRNA upstream 37415 944861 ~ 951696 (-) True AMCG00002749
AMCG00002754 mRNA upstream 112867 1020313 ~ 1031864 (-) True AMCG00002754
AMCG00002756 mRNA upstream 126000 1033446 ~ 1034599 (-) True AMCG00002756
TU174097 other downstream 82864 812745 ~ 821591 (-) False AMCG00002743
TU174098 other downstream 93450 808155 ~ 811005 (-) False AMCG00002743
TU173921 other downstream 715197 184121 ~ 189258 (-) True AMCG00002725
TU173884 other downstream 757615 144926 ~ 146840 (-) True G138245
TU174135 other upstream 15564 923010 ~ 924234 (-) True AMCG00002752
TU174136 other upstream 15564 923010 ~ 924234 (-) False AMCG00002752
TU174137 other upstream 15564 923010 ~ 925398 (-) False AMCG00002752
TU174506 other upstream 1810762 2718208 ~ 2719419 (-) True G138741
TU174734 other upstream 3030318 3937764 ~ 3950168 (-) False AMCG00002828

Expression Profile