RNA id: AMCG00002773



Basic Information


Item Value
RNA id AMCG00002773
length 288
RNA type mRNA
GC content 0.54
exon number 2
gene id AMCG00002773
representative True

Chromosome Information


Item Value
chromosome id CM030139.1
NCBI id CM030139.1
chromosome length 23121578
location 2254029 ~ 2257547 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


ATGAGTGCAAATAGTGCAGCCATCAGAAGAATCACTACGATCTCACAGGCAGCTGCAGAGATCCTGATCAGGCAGCTCGTGGACGATGTGGCATTTCGTCCTGGtgtCGAGCTCGACTTCAAGCAGCAAGAGGACAAACTCCAGCCGCTGATGAAGAAGCTCTGTCCCACCGAGGACCCTCAGGTGCCATCTCTGCCTTACCCCCAGGAGGGATACACGTCCACCCCCAAGCGGAAATCGAAAACAGAGTCCAAGAAACACGCGCGGTGGAAACTGTGGTTTCTATGA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU174333 lncRNA upstream 193425 2060377 ~ 2060604 (+) True G138593
TU174289 lncRNA upstream 314904 1938147 ~ 1939125 (+) True G138562
TU174210 lncRNA upstream 858766 1375707 ~ 1395263 (+) True G138502
TU174181 lncRNA upstream 1165213 1088439 ~ 1088816 (+) True G138475
TU174084 lncRNA upstream 1315534 938147 ~ 938495 (+) True G138399
TU174384 lncRNA downstream 204091 2461638 ~ 2463636 (+) True G138634
TU174473 lncRNA downstream 407911 2665458 ~ 2667538 (+) True G138712
TU174480 lncRNA downstream 433882 2691429 ~ 2691840 (+) True G138719
TU174604 lncRNA downstream 915360 3172907 ~ 3177610 (+) True G138816
TU174676 lncRNA downstream 1118699 3376246 ~ 3378027 (+) True G138871
AMCG00002774 mRNA upstream 13137 2233287 ~ 2240892 (+) True AMCG00002774
AMCG00002770 mRNA upstream 231203 2019238 ~ 2022826 (+) True AMCG00002770
AMCG00002765 mRNA upstream 740945 1504997 ~ 1513084 (+) True AMCG00002765
AMCG00002766 mRNA upstream 761274 1483016 ~ 1492755 (+) True AMCG00002766
AMCG00002763 mRNA upstream 817127 1429991 ~ 1436902 (+) True AMCG00002763
AMCG00002776 mRNA downstream 92502 2350049 ~ 2374439 (+) True AMCG00002776
AMCG00002777 mRNA downstream 148488 2406035 ~ 2440932 (+) True AMCG00002777
AMCG00002780 mRNA downstream 192643 2450190 ~ 2459837 (+) True AMCG00002780
AMCG00002779 mRNA downstream 206933 2464480 ~ 2470667 (+) True AMCG00002779
AMCG00002778 mRNA downstream 214357 2471904 ~ 2476606 (+) True AMCG00002778
TU174215 other upstream 843941 1407046 ~ 1410088 (+) False AMCG00002762
TU174214 other upstream 851600 1401289 ~ 1402429 (+) True G138506
TU174182 other upstream 1156554 1095939 ~ 1097475 (+) True G138476
TU174180 other upstream 1161077 1089278 ~ 1092952 (+) True AMCG00002757
TU174083 other upstream 1323431 926469 ~ 930598 (+) True AMCG00002748
TU174426 other downstream 234539 2492086 ~ 2494594 (+) True AMCG00002784
TU174568 other downstream 849911 3107458 ~ 3116081 (+) True G138790
TU174694 other downstream 1171142 3428689 ~ 3596108 (+) True G138888
TU174764 other downstream 1771977 4029524 ~ 4029924 (+) True G138941
TU175054 other downstream 2839184 5096731 ~ 5098744 (+) True G139176

Expression Profile