RNA id: AMCG00002795



Basic Information


Item Value
RNA id AMCG00002795
length 483
RNA type mRNA
GC content 0.63
exon number 3
gene id AMCG00002795
representative True

Chromosome Information


Item Value
chromosome id CM030139.1
NCBI id CM030139.1
chromosome length 23121578
location 2762592 ~ 2764651 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


ATGTTGGAGTATCAGGACGTCGGGGTCAAAATGACACCCAGCCACAGGATATCTTTCTCCATTCTGGACATCCTGGACCCGAACAAATTCACCAGGAAGAAGCCTGGGACTGTGGACAGGGTGCGGGACTGCGCGGACGGGCCAGCTGGGGACAGAGATGCAGGCAGGGAAAGGGGAGACGGGCGGACACACACGGGACACGCCGTCCACAGGGACCCCGAGGGGGTGTCCTCGCTGCCGGGCACAGATCTCGACGCTTCACCGCACGGAGGAGGTGAGGACAAGGACAGCGGCTGCGACCTGGACCTGCGCACCAGTCCAGGCCCCGGTGCGCTGAGCTTTCAAACTTTTCACACCTTCAACCCCGGGAATGTGGTCTTTCACACGGGCGGGCCGGTGCCGCTGTCCTCCCCCGGGGCGGCTCTGAACCCTTTCCTGCACAGTGGGTACCTGCAGCCGGGCTTTTACGCACCGCAGGTATGA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU174480 lncRNA upstream 70752 2691429 ~ 2691840 (+) True G138719
TU174473 lncRNA upstream 95054 2665458 ~ 2667538 (+) True G138712
TU174384 lncRNA upstream 298956 2461638 ~ 2463636 (+) True G138634
TU174333 lncRNA upstream 701988 2060377 ~ 2060604 (+) True G138593
TU174289 lncRNA upstream 823467 1938147 ~ 1939125 (+) True G138562
TU174604 lncRNA downstream 408256 3172907 ~ 3177610 (+) True G138816
TU174676 lncRNA downstream 611595 3376246 ~ 3378027 (+) True G138871
TU174711 lncRNA downstream 962846 3727497 ~ 3727731 (+) True G138903
TU174713 lncRNA downstream 1160518 3925169 ~ 3928654 (+) True G138905
TU174716 lncRNA downstream 1160518 3925169 ~ 3928619 (+) False G138905
AMCG00002792 mRNA upstream 38814 2706965 ~ 2723778 (+) True AMCG00002792
AMCG00002793 mRNA upstream 58018 2694526 ~ 2704574 (+) True AMCG00002793
AMCG00002787 mRNA upstream 102584 2656030 ~ 2660008 (+) True AMCG00002787
AMCG00002788 mRNA upstream 128954 2625983 ~ 2633638 (+) True AMCG00002788
AMCG00002789 mRNA upstream 138911 2622639 ~ 2623681 (+) True AMCG00002789
AMCG00002796 mRNA downstream 2107 2766758 ~ 2766973 (+) True AMCG00002796
AMCG00002794 mRNA downstream 3800 2768451 ~ 2776607 (+) True AMCG00002794
AMCG00002800 mRNA downstream 100792 2865443 ~ 2885096 (+) True AMCG00002800
AMCG00002801 mRNA downstream 145302 2909953 ~ 2956770 (+) True AMCG00002801
AMCG00002803 mRNA downstream 282825 3047476 ~ 3051879 (+) True AMCG00002803
TU174426 other upstream 267998 2492086 ~ 2494594 (+) True AMCG00002784
TU174215 other upstream 1352504 1407046 ~ 1410088 (+) False AMCG00002762
TU174214 other upstream 1360163 1401289 ~ 1402429 (+) True G138506
TU174182 other upstream 1665117 1095939 ~ 1097475 (+) True G138476
TU174180 other upstream 1669640 1089278 ~ 1092952 (+) True AMCG00002757
TU174568 other downstream 342807 3107458 ~ 3116081 (+) True G138790
TU174694 other downstream 664038 3428689 ~ 3596108 (+) True G138888
TU174764 other downstream 1264873 4029524 ~ 4029924 (+) True G138941
TU175054 other downstream 2332080 5096731 ~ 5098744 (+) True G139176
TU175429 other downstream 3383097 6147748 ~ 6153120 (+) True G139492

Expression Profile