RNA id: AMCG00002797


Basic Information

Item Value
RNA id AMCG00002797
length 294
RNA type mRNA
GC content 0.63
exon number 2
gene id AMCG00002797
representative True

Chromosome Information

Item Value
chromosome id CM030139.1
NCBI id CM030139.1
chromosome length 23121578
location 2750789 ~ 2751466 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ATGGGTCTCGGTCTTGGCCTGTTGCTGCCGCCGTGCAGGATCCGGGCCTCGGACCTGAAGCTGCGGTTCTGCACCAACGAGACGCAGGCCACCCGGGAGAGCTTCGTGGCCAAGCTGCGGCGGCTCGGCTTCGACATCTCCGTCAGCGAGTTTGACAAGCTGGACAAGTCGAACCCGAACTGCGTGGTGATCGGAGACGCGGCCGATAACTTCTCCTACAAGAACCTCAACGACGCCTTCCGGGTTCTCATGGGGCTGGAGAAGCCGGCGCTCTTCTCGTTGGGACGGGGGTGA

Function

GO: NA

KEGG:

id description
ko04120 Ubiquitin mediated proteolysis

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU174507 lncRNA downstream 30085 2720412 ~ 2720704 (-) True G138742
TU174503 lncRNA downstream 36101 2714377 ~ 2714688 (-) True G138738
TU174502 lncRNA downstream 42714 2707869 ~ 2708075 (-) True G138737
TU174481 lncRNA downstream 58920 2691430 ~ 2691869 (-) True G138720
TU174435 lncRNA downstream 248475 2502113 ~ 2502314 (-) True G138678
TU174584 lncRNA upstream 309095 3060561 ~ 3113082 (-) True G138799
TU174679 lncRNA upstream 624782 3376248 ~ 3378038 (-) True G138873
TU174717 lncRNA upstream 1173701 3925167 ~ 3928618 (-) True G138906
TU174779 lncRNA upstream 1324149 4075615 ~ 4076838 (-) True G138948
TU174869 lncRNA upstream 1704326 4455792 ~ 4456002 (-) True G139024
AMCG00002799 mRNA downstream 1482 2748112 ~ 2749307 (-) True AMCG00002799
AMCG00002791 mRNA downstream 79716 2660906 ~ 2671073 (-) True AMCG00002791
AMCG00002790 mRNA downstream 96379 2635291 ~ 2654410 (-) True AMCG00002790
AMCG00002785 mRNA downstream 258906 2480058 ~ 2491883 (-) True AMCG00002785
AMCG00002781 mRNA downstream 284094 2460051 ~ 2466695 (-) True AMCG00002781
AMCG00002798 mRNA upstream 7408 2758874 ~ 2759867 (-) True AMCG00002798
AMCG00002802 mRNA upstream 214528 2965994 ~ 2973796 (-) True AMCG00002802
AMCG00002807 mRNA upstream 364395 3115861 ~ 3121097 (-) True AMCG00002807
AMCG00002809 mRNA upstream 373458 3124924 ~ 3133886 (-) True AMCG00002809
AMCG00002808 mRNA upstream 387482 3138948 ~ 3140649 (-) True AMCG00002808
TU174506 other downstream 31370 2718208 ~ 2719419 (-) True G138741
TU174137 other downstream 1825391 923010 ~ 925398 (-) False AMCG00002752
TU174135 other downstream 1826555 923010 ~ 924234 (-) True AMCG00002752
TU174136 other downstream 1826555 923010 ~ 924234 (-) False AMCG00002752
TU174097 other downstream 1929198 812745 ~ 821591 (-) False AMCG00002743
TU174734 other upstream 1186298 3937764 ~ 3950168 (-) False AMCG00002828
TU174755 other upstream 1250184 4001650 ~ 4002804 (-) True G138932
TU175621 other upstream 4311007 7062473 ~ 7066321 (-) True AMCG00002935
TU175710 other upstream 4597345 7348811 ~ 7352821 (-) True AMCG00002945
TU175851 other upstream 5179791 7931257 ~ 7938241 (-) False AMCG00002970

Expression Profile