RNA id: AMCG00002813


Basic Information

Item Value
RNA id AMCG00002813
length 498
RNA type mRNA
GC content 0.58
exon number 4
gene id AMCG00002813
representative True

Chromosome Information

Item Value
chromosome id CM030139.1
NCBI id CM030139.1
chromosome length 23121578
location 3213625 ~ 3219238 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ATGCTGAGGCAGAAGACAAGAGTATTGTGCCCCAACAACCACCCCAACCACCACCCCAACAACAACCACACCCACCACCACTCCAGACTGGAAAACTCAAACGGATGTGTGTATGACTCTGTTTCGGTGTACGACGGACCCTCCACCAGCTCCCCGCTGCTGGGGATCATGTGCGGGAATGATAATTACTCATTCATGTCCACCTCCAACTCTATGACGGTGGTCTTCCGCTCCGATGGTTCGGTGACGAACCCAGGATTCCTCGCTCAGTACCGGGCCCTCTCCCCAGTGCAGGTGGAGTGCTCTAGTGAGCTCATGAGGGTCGGCCTGGAGCTGTCCTTCCTGCACGCGCTGGACTACAACATCAGCGACATCAGCGTGAACGACCCGTCCTGCCGTCCTCAAAACAACGGCTCCTACGCCATCTTCAGCATCCCGCTGGACGGCTGCGGGACTTTCCAACAGGTAAACCCCCATCCTGCCCGGGGGAAGGACTAG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU174584 lncRNA downstream 100543 3060561 ~ 3113082 (-) True G138799
TU174507 lncRNA downstream 492921 2720412 ~ 2720704 (-) True G138742
TU174503 lncRNA downstream 498937 2714377 ~ 2714688 (-) True G138738
TU174502 lncRNA downstream 505550 2707869 ~ 2708075 (-) True G138737
TU174481 lncRNA downstream 521756 2691430 ~ 2691869 (-) True G138720
TU174679 lncRNA upstream 157010 3376248 ~ 3378038 (-) True G138873
TU174717 lncRNA upstream 705929 3925167 ~ 3928618 (-) True G138906
TU174779 lncRNA upstream 856377 4075615 ~ 4076838 (-) True G138948
TU174869 lncRNA upstream 1236554 4455792 ~ 4456002 (-) True G139024
TU174870 lncRNA upstream 1246716 4465954 ~ 4466189 (-) True G139025
AMCG00002812 mRNA downstream 7069 3198668 ~ 3206556 (-) True AMCG00002812
AMCG00002811 mRNA downstream 22129 3181102 ~ 3191496 (-) True AMCG00002811
AMCG00002805 mRNA downstream 33061 3169166 ~ 3180564 (-) True AMCG00002805
AMCG00002806 mRNA downstream 45121 3162801 ~ 3168504 (-) True AMCG00002806
AMCG00002808 mRNA downstream 72976 3138948 ~ 3140649 (-) True AMCG00002808
AMCG00002818 mRNA upstream 51251 3270489 ~ 3293427 (-) True AMCG00002818
AMCG00002820 mRNA upstream 85327 3304565 ~ 3328956 (-) True AMCG00002820
AMCG00002817 mRNA upstream 112479 3331717 ~ 3345334 (-) True AMCG00002817
AMCG00002819 mRNA upstream 159368 3378606 ~ 3379298 (-) True AMCG00002819
AMCG00002824 mRNA upstream 446211 3665449 ~ 3667197 (-) True AMCG00002824
TU174506 other downstream 494206 2718208 ~ 2719419 (-) True G138741
TU174137 other downstream 2288227 923010 ~ 925398 (-) False AMCG00002752
TU174135 other downstream 2289391 923010 ~ 924234 (-) True AMCG00002752
TU174136 other downstream 2289391 923010 ~ 924234 (-) False AMCG00002752
TU174097 other downstream 2392034 812745 ~ 821591 (-) False AMCG00002743
TU174734 other upstream 718526 3937764 ~ 3950168 (-) False AMCG00002828
TU174755 other upstream 782412 4001650 ~ 4002804 (-) True G138932
TU175621 other upstream 3843235 7062473 ~ 7066321 (-) True AMCG00002935
TU175710 other upstream 4129573 7348811 ~ 7352821 (-) True AMCG00002945
TU175851 other upstream 4712019 7931257 ~ 7938241 (-) False AMCG00002970

Expression Profile