Item | Value |
---|---|
RNA id | AMCG00002871 |
length | 1293 |
RNA type | mRNA |
GC content | 0.60 |
exon number | 2 |
gene id | AMCG00002871 |
representative | True |
Item | Value |
---|---|
chromosome id | CM030139.1 |
NCBI id | CM030139.1 |
chromosome length | 23121578 |
location | 5231982 ~ 5233827 (+) |
genome version | AmiCal1_2021_bowfin_Genome |
species | bowfin (Amia calva) |
id | name | namespace |
---|---|---|
GO:0048168 | regulation of neuronal synaptic plasticity | biological_process |
GO:0006355 | regulation of transcription, DNA-templated | biological_process |
GO:0071320 | cellular response to cAMP | biological_process |
GO:0021575 | hindbrain morphogenesis | biological_process |
GO:0071371 | cellular response to gonadotropin stimulus | biological_process |
GO:0043066 | negative regulation of apoptotic process | biological_process |
GO:0021654 | rhombomere boundary formation | biological_process |
GO:0035914 | skeletal muscle cell differentiation | biological_process |
GO:0048932 | myelination of posterior lateral line nerve axons | biological_process |
GO:0005634 | nucleus | cellular_component |
GO:0005737 | cytoplasm | cellular_component |
GO:0046872 | metal ion binding | molecular_function |
GO:0003677 | DNA binding | molecular_function |
GO:0003700 | DNA-binding transcription factor activity | molecular_function |
id | description |
---|---|
K12496 | EGR2; early growth response protein 2 |
RNA id | RNA type | direction | distance | location | representative | gene id |
---|---|---|---|---|---|---|
TU175041 | lncRNA | upstream | 163087 | 5067472 ~ 5068895 (+) | True | G139170 |
TU174942 | lncRNA | upstream | 429738 | 4798613 ~ 4802244 (+) | True | G139084 |
TU174889 | lncRNA | upstream | 519157 | 4626657 ~ 4712825 (+) | True | G139044 |
TU174883 | lncRNA | upstream | 647815 | 4583865 ~ 4584167 (+) | True | G139038 |
TU174771 | lncRNA | upstream | 1155194 | 4072281 ~ 4076788 (+) | True | G138946 |
TU175087 | lncRNA | downstream | 5523 | 5239350 ~ 5239490 (+) | True | G139205 |
TU175122 | lncRNA | downstream | 132608 | 5366435 ~ 5366683 (+) | True | G139238 |
TU175151 | lncRNA | downstream | 205950 | 5439777 ~ 5442279 (+) | True | G139263 |
TU175250 | lncRNA | downstream | 584225 | 5818052 ~ 5819125 (+) | True | G139351 |
TU175425 | lncRNA | downstream | 904294 | 6138121 ~ 6140671 (+) | True | G139488 |
AMCG00002868 | mRNA | upstream | 44536 | 5153304 ~ 5187446 (+) | True | AMCG00002868 |
AMCG00002867 | mRNA | upstream | 207399 | 5012179 ~ 5024583 (+) | True | AMCG00002867 |
AMCG00002866 | mRNA | upstream | 223237 | 4963957 ~ 5008745 (+) | True | AMCG00002866 |
AMCG00002864 | mRNA | upstream | 279577 | 4952100 ~ 4952405 (+) | True | AMCG00002864 |
AMCG00002862 | mRNA | upstream | 298777 | 4928430 ~ 4933205 (+) | True | AMCG00002862 |
AMCG00002872 | mRNA | downstream | 43088 | 5276915 ~ 5285072 (+) | True | AMCG00002872 |
AMCG00002881 | mRNA | downstream | 146786 | 5380613 ~ 5383693 (+) | True | AMCG00002881 |
AMCG00002882 | mRNA | downstream | 150025 | 5383852 ~ 5386429 (+) | True | AMCG00002882 |
AMCG00002880 | mRNA | downstream | 184848 | 5418675 ~ 5435914 (+) | True | AMCG00002880 |
AMCG00002888 | mRNA | downstream | 303663 | 5537490 ~ 5616805 (+) | True | AMCG00002888 |
TU175054 | other | upstream | 133238 | 5096731 ~ 5098744 (+) | True | G139176 |
TU174764 | other | upstream | 1202058 | 4029524 ~ 4029924 (+) | True | G138941 |
TU174694 | other | upstream | 1635874 | 3428689 ~ 3596108 (+) | True | G138888 |
TU174568 | other | upstream | 2115901 | 3107458 ~ 3116081 (+) | True | G138790 |
TU174426 | other | upstream | 2737388 | 2492086 ~ 2494594 (+) | True | AMCG00002784 |
TU175429 | other | downstream | 913921 | 6147748 ~ 6153120 (+) | True | G139492 |
TU175613 | other | downstream | 1833116 | 7066943 ~ 7073536 (+) | True | AMCG00002939 |
TU175723 | other | downstream | 2142860 | 7376687 ~ 7379487 (+) | True | G139720 |
TU175799 | other | downstream | 2689355 | 7923182 ~ 7926832 (+) | True | G139784 |
TU175890 | other | downstream | 2803750 | 8037577 ~ 8044220 (+) | True | AMCG00002965 |