Gene
RNA
| Item | Value |
|---|---|
| RNA id | AMCG00002897 |
| length | 1325 |
| RNA type | mRNA |
| GC content | 0.46 |
| exon number | 4 |
| gene id | AMCG00002897 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030139.1 |
| NCBI id | CM030139.1 |
| chromosome length | 23121578 |
| location | 5858274 ~ 5879024 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | name | namespace |
|---|---|---|
| GO:0052547 | regulation of peptidase activity | biological_process |
| GO:0051336 | regulation of hydrolase activity | biological_process |
| GO:0005540 | hyaluronic acid binding | molecular_function |
| GO:0031406 | carboxylic acid binding | molecular_function |
| GO:0043177 | organic acid binding | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU175250 | lncRNA | upstream | 39149 | 5818052 ~ 5819125 (+) | True | G139351 |
| TU175151 | lncRNA | upstream | 415995 | 5439777 ~ 5442279 (+) | True | G139263 |
| TU175122 | lncRNA | upstream | 491591 | 5366435 ~ 5366683 (+) | True | G139238 |
| TU175087 | lncRNA | upstream | 618784 | 5239350 ~ 5239490 (+) | True | G139205 |
| TU175041 | lncRNA | upstream | 789379 | 5067472 ~ 5068895 (+) | True | G139170 |
| TU175425 | lncRNA | downstream | 259097 | 6138121 ~ 6140671 (+) | True | G139488 |
| TU175436 | lncRNA | downstream | 315587 | 6194611 ~ 6197030 (+) | True | G139498 |
| TU175445 | lncRNA | downstream | 319246 | 6198270 ~ 6198502 (+) | True | G139504 |
| TU175446 | lncRNA | downstream | 320335 | 6199359 ~ 6199856 (+) | True | G139505 |
| TU175447 | lncRNA | downstream | 322179 | 6201203 ~ 6201470 (+) | True | G139506 |
| AMCG00002895 | mRNA | upstream | 6403 | 5850528 ~ 5851871 (+) | True | AMCG00002895 |
| AMCG00002896 | mRNA | upstream | 40588 | 5779744 ~ 5817686 (+) | True | AMCG00002896 |
| AMCG00002891 | mRNA | upstream | 127979 | 5715412 ~ 5730295 (+) | True | AMCG00002891 |
| AMCG00002892 | mRNA | upstream | 168582 | 5676170 ~ 5689692 (+) | True | AMCG00002892 |
| AMCG00002887 | mRNA | upstream | 188858 | 5667592 ~ 5669416 (+) | True | AMCG00002887 |
| AMCG00002900 | mRNA | downstream | 29953 | 5908977 ~ 5913523 (+) | True | AMCG00002900 |
| AMCG00002903 | mRNA | downstream | 132804 | 6011828 ~ 6016245 (+) | True | AMCG00002903 |
| AMCG00002904 | mRNA | downstream | 141234 | 6020258 ~ 6038908 (+) | True | AMCG00002904 |
| AMCG00002911 | mRNA | downstream | 207536 | 6086560 ~ 6092066 (+) | True | AMCG00002911 |
| AMCG00002908 | mRNA | downstream | 215081 | 6094105 ~ 6110512 (+) | True | AMCG00002908 |
| TU175054 | other | upstream | 759530 | 5096731 ~ 5098744 (+) | True | G139176 |
| TU174764 | other | upstream | 1828350 | 4029524 ~ 4029924 (+) | True | G138941 |
| TU174694 | other | upstream | 2262166 | 3428689 ~ 3596108 (+) | True | G138888 |
| TU174568 | other | upstream | 2742193 | 3107458 ~ 3116081 (+) | True | G138790 |
| TU174426 | other | upstream | 3363680 | 2492086 ~ 2494594 (+) | True | AMCG00002784 |
| TU175429 | other | downstream | 268724 | 6147748 ~ 6153120 (+) | True | G139492 |
| TU175613 | other | downstream | 1187919 | 7066943 ~ 7073536 (+) | True | AMCG00002939 |
| TU175723 | other | downstream | 1497663 | 7376687 ~ 7379487 (+) | True | G139720 |
| TU175799 | other | downstream | 2044158 | 7923182 ~ 7926832 (+) | True | G139784 |
| TU175890 | other | downstream | 2158553 | 8037577 ~ 8044220 (+) | True | AMCG00002965 |
