Gene
RNA
| Item | Value |
|---|---|
| RNA id | AMCG00002920 |
| length | 1212 |
| RNA type | mRNA |
| GC content | 0.52 |
| exon number | 9 |
| gene id | AMCG00002920 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030139.1 |
| NCBI id | CM030139.1 |
| chromosome length | 23121578 |
| location | 6214859 ~ 6227743 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | name | namespace |
|---|---|---|
| GO:0001666 | response to hypoxia | biological_process |
| GO:0016042 | lipid catabolic process | biological_process |
| GO:0016788 | hydrolase activity, acting on ester bonds | molecular_function |
| id | description |
|---|---|
| K01052 | LIPA; lysosomal acid lipase/cholesteryl ester hydrolase |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU175433 | lncRNA | downstream | 56096 | 6157743 ~ 6158763 (-) | True | G139496 |
| TU175135 | lncRNA | downstream | 818300 | 5396339 ~ 5396559 (-) | True | G139249 |
| TU174884 | lncRNA | downstream | 1630687 | 4583865 ~ 4584172 (-) | True | G139039 |
| TU174874 | lncRNA | downstream | 1703552 | 4507504 ~ 4511307 (-) | True | G139029 |
| TU174873 | lncRNA | downstream | 1718497 | 4496162 ~ 4496362 (-) | True | G139028 |
| TU175564 | lncRNA | upstream | 254524 | 6482267 ~ 6510125 (-) | True | G139593 |
| TU175618 | lncRNA | upstream | 773922 | 7001665 ~ 7073536 (-) | True | G139639 |
| TU175655 | lncRNA | upstream | 991126 | 7218869 ~ 7219192 (-) | True | G139668 |
| TU175760 | lncRNA | upstream | 1227801 | 7455544 ~ 7458491 (-) | True | G139752 |
| TU175854 | lncRNA | upstream | 1718309 | 7946052 ~ 7946521 (-) | True | G139825 |
| AMCG00002919 | mRNA | downstream | 12863 | 6196974 ~ 6201996 (-) | True | AMCG00002919 |
| AMCG00002912 | mRNA | downstream | 35658 | 6173898 ~ 6179201 (-) | True | AMCG00002912 |
| AMCG00002913 | mRNA | downstream | 70466 | 6142903 ~ 6144393 (-) | True | AMCG00002913 |
| AMCG00002914 | mRNA | downstream | 73847 | 6132834 ~ 6141012 (-) | True | AMCG00002914 |
| AMCG00002905 | mRNA | downstream | 128387 | 6083761 ~ 6086472 (-) | True | AMCG00002905 |
| AMCG00002922 | mRNA | upstream | 69994 | 6297737 ~ 6319780 (-) | True | AMCG00002922 |
| AMCG00002924 | mRNA | upstream | 103907 | 6331650 ~ 6344823 (-) | True | AMCG00002924 |
| AMCG00002923 | mRNA | upstream | 118097 | 6345840 ~ 6354866 (-) | True | AMCG00002923 |
| AMCG00002927 | mRNA | upstream | 194261 | 6422004 ~ 6429440 (-) | True | AMCG00002927 |
| AMCG00002932 | mRNA | upstream | 417889 | 6645632 ~ 6737274 (-) | True | AMCG00002932 |
| TU174755 | other | downstream | 2212055 | 4001650 ~ 4002804 (-) | True | G138932 |
| TU174734 | other | downstream | 2264691 | 3937764 ~ 3950168 (-) | False | AMCG00002828 |
| TU174506 | other | downstream | 3495440 | 2718208 ~ 2719419 (-) | True | G138741 |
| TU174137 | other | downstream | 5289461 | 923010 ~ 925398 (-) | False | AMCG00002752 |
| TU174136 | other | downstream | 5290625 | 923010 ~ 924234 (-) | False | AMCG00002752 |
| TU175621 | other | upstream | 834730 | 7062473 ~ 7066321 (-) | True | AMCG00002935 |
| TU175710 | other | upstream | 1121068 | 7348811 ~ 7352821 (-) | True | AMCG00002945 |
| TU175851 | other | upstream | 1703514 | 7931257 ~ 7938241 (-) | False | AMCG00002970 |
| TU176000 | other | upstream | 2257618 | 8485361 ~ 8494596 (-) | True | G139933 |
| TU176103 | other | upstream | 2619289 | 8847032 ~ 8847840 (-) | True | G140006 |
