Gene
RNA
| Item | Value |
|---|---|
| RNA id | AMCG00002928 |
| length | 270 |
| RNA type | mRNA |
| GC content | 0.49 |
| exon number | 1 |
| gene id | AMCG00002928 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030139.1 |
| NCBI id | CM030139.1 |
| chromosome length | 23121578 |
| location | 6454872 ~ 6455141 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | name | namespace |
|---|---|---|
| GO:0006468 | protein phosphorylation | biological_process |
| GO:0005524 | ATP binding | molecular_function |
| GO:0030553 | cGMP binding | molecular_function |
| GO:0004692 | cGMP-dependent protein kinase activity | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU175538 | lncRNA | upstream | 31704 | 6420166 ~ 6423168 (+) | True | G139572 |
| TU175539 | lncRNA | upstream | 36074 | 6418438 ~ 6418798 (+) | True | G139573 |
| TU175484 | lncRNA | upstream | 143602 | 6297734 ~ 6311270 (+) | True | G139531 |
| TU175448 | lncRNA | upstream | 251813 | 6202844 ~ 6203059 (+) | True | G139507 |
| TU175447 | lncRNA | upstream | 253402 | 6201203 ~ 6201470 (+) | True | G139506 |
| TU175611 | lncRNA | downstream | 607382 | 7062523 ~ 7065465 (+) | False | G139633 |
| TU175612 | lncRNA | downstream | 607382 | 7062523 ~ 7066374 (+) | True | G139633 |
| TU175640 | lncRNA | downstream | 697396 | 7152537 ~ 7152739 (+) | True | G139656 |
| TU175654 | lncRNA | downstream | 741737 | 7196878 ~ 7197097 (+) | True | G139667 |
| TU175809 | lncRNA | downstream | 1454208 | 7909349 ~ 7910999 (+) | False | AMCG00002960 |
| AMCG00002926 | mRNA | upstream | 35489 | 6410426 ~ 6419383 (+) | True | AMCG00002926 |
| AMCG00002925 | mRNA | upstream | 45777 | 6397457 ~ 6409095 (+) | True | AMCG00002925 |
| AMCG00002921 | mRNA | upstream | 125108 | 6320136 ~ 6329764 (+) | True | AMCG00002921 |
| AMCG00002915 | mRNA | upstream | 188272 | 6255170 ~ 6266600 (+) | True | AMCG00002915 |
| AMCG00002918 | mRNA | upstream | 220717 | 6228187 ~ 6234155 (+) | True | AMCG00002918 |
| AMCG00002930 | mRNA | downstream | 8572 | 6463713 ~ 6464276 (+) | True | AMCG00002930 |
| AMCG00002929 | mRNA | downstream | 101329 | 6556470 ~ 6575271 (+) | True | AMCG00002929 |
| AMCG00002931 | mRNA | downstream | 123842 | 6578983 ~ 6581030 (+) | True | AMCG00002931 |
| AMCG00002939 | mRNA | downstream | 611714 | 7066855 ~ 7073538 (+) | False | AMCG00002939 |
| AMCG00002938 | mRNA | downstream | 620133 | 7075274 ~ 7077227 (+) | True | AMCG00002938 |
| TU175429 | other | upstream | 301752 | 6147748 ~ 6153120 (+) | True | G139492 |
| TU175054 | other | upstream | 1356128 | 5096731 ~ 5098744 (+) | True | G139176 |
| TU174764 | other | upstream | 2424948 | 4029524 ~ 4029924 (+) | True | G138941 |
| TU174694 | other | upstream | 2858764 | 3428689 ~ 3596108 (+) | True | G138888 |
| TU174568 | other | upstream | 3338791 | 3107458 ~ 3116081 (+) | True | G138790 |
| TU175613 | other | downstream | 611802 | 7066943 ~ 7073536 (+) | True | AMCG00002939 |
| TU175723 | other | downstream | 921546 | 7376687 ~ 7379487 (+) | True | G139720 |
| TU175799 | other | downstream | 1468041 | 7923182 ~ 7926832 (+) | True | G139784 |
| TU175890 | other | downstream | 1582436 | 8037577 ~ 8044220 (+) | True | AMCG00002965 |
| TU176130 | other | downstream | 2846471 | 9301612 ~ 9304840 (+) | True | AMCG00002998 |
