RNA id: AMCG00002984


Basic Information

Item Value
RNA id AMCG00002984
length 1736
RNA type mRNA
GC content 0.47
exon number 14
gene id AMCG00002984
representative True

Chromosome Information

Item Value
chromosome id CM030139.1
NCBI id CM030139.1
chromosome length 23121578
location 8553579 ~ 8564616 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ATGTGGCTCAGAGCTATGCAGGGGGCTACCCACCCCAACCAGGCGGATACCCACCCCAACAAGGTGGATACCCACCCCAACCAGGAGGATACCCACCCCAACAAGGCGGATACCCCCAGCCTGGTGGCTACCCTTCACAGCCAGGCGGCTTTCCTGCGCCAGGGGGTGGGTATCCACAAGCAGGCTGATCAGATGGCATCAAACCAGGGAGGATTTCAGCCTAATCCATCAATGTTTAACCAAACCCCAAGCTATCCTGGCCAGCCAGGGGGGTATGGTGCACCCCAACCGAACCAGCAGCCGTATGGCATGTTTCCTCAGCCGGGAGGGAACGTGCCTCCGGGAATGGGATTTCCAGGAGGGCCTGCCCCTACTCAGCCCATGCCTGGTTACCCTGGAGCCCCTGCAGGAAGCCCATCCATGCCTGCCTACACGCCAAGTGCTCCTGGAGCCCCCGTTGTGCCACCTATAAATCGAGGGTTCCGAGGTGTCATCAGTGACTTTCCAGGTGCTGACCCCCTGAAGGATGTGGAAGTCCTACGCAAGGCAATGAAGGGCTTTGGCACTGATGAGCAAGCTATTATTGAGCTGCTTGGAAATCGCTCAAACAAGCAGAGAGTACCGCTGTGTATCACCTACAAAACGGCTTATGGGAAGgATTTAATTAAGGATTTGAAGTCCGAACTCTCGGGAAACTTTGAGAAAACTGTTCTGGCCATGCTGCAGACTTCTGTAATGTATGATGCCCATGAAATCCGAAACGCCATAAAGGGTGCTGGTACAGATGAACAGTGCTTAATTGAGATTCTGTCTTCTCGGAGTAACGCTGAAATACATGAGattaataaagtttacaaaacaGAATTTAAGAAGACTCTGGAGGAGGCCATTACCAGTGACACATCAGGACACTTCCGCAGACTTCTGGTTTCACTGGCTCAGGGTAACCGGGATGAAAGGGAAAATGTGGATATTTCTTTGGCCAAACAAGATGCTCAGAGTCTGTATGCTGCAGGAGAGAACAAACTCGGAACAGATGAGTCGAAATTTAACGCTATTCTTTGTGCACGAAGCAAAGCTCATCTGAGAGCAGtttttcaCGAGTATCAGCAAATGTGTGGCCGGGACATCGAGAAGAGCATTTCCAGAGAGATGTCAGGAGACCTTGAGAAGGGCATGCTGGCCGTGGtgAAGTGCATCAAAAATACACCAGCTTACTTTGCTGAAAGACTCTACAAGTCCATGAAGGGACTGGGAACCGATGACAGCACTCTTATCCGAATCATGGTGTCCCGTTCGGAAGTTGACATGCTGGATATCCGACAGgagtacaaaaaaaactatggaAAATCCCTGTACACTGATATTACTGGTGATAGTTCTGGGGATTACAGGAAGATACTGTTGAAGCTCTGTGGAGGAAACGATTAACAGAATATGAAGATATCGATCCATTGAAGATCTGTCAAACCCCAGTTATGCTTTGAAAAATACctgctgttttcattattagtgttgcatgttttattatttcacttctTTCAAAAGGGTAGACTAAGCACACTTCTATGaacctttttatttctgtatccaTTATTTCTGTTTAAGTTAAGTGATTTAAACACtggttttggagagattgttcAATGTCAGCTAGTATATACAATATTCGTcatatctaaaacaaaaaaaaaaacacttaatgaaTGCTGGACATATATTACTGCTTCAGTGAT

Function

GO:

id name namespace
GO:0050819 negative regulation of coagulation biological_process
GO:0005509 calcium ion binding molecular_function
GO:0005544 calcium-dependent phospholipid binding molecular_function

KEGG:

id description
K17095 ANXA7_11; annexin A7/11

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU175986 lncRNA upstream 10296 8542727 ~ 8543283 (+) True G139919
TU175985 lncRNA upstream 17205 8536080 ~ 8536374 (+) True G139918
TU175984 lncRNA upstream 45096 8507877 ~ 8508483 (+) True G139917
TU175982 lncRNA upstream 46476 8499384 ~ 8507103 (+) True G139916
TU175977 lncRNA upstream 54353 8498014 ~ 8499226 (+) True G139915
TU176090 lncRNA downstream 285563 8850179 ~ 8851686 (+) True G139995
TU176092 lncRNA downstream 355852 8920468 ~ 8920730 (+) True G139997
TU176093 lncRNA downstream 368134 8932750 ~ 8932969 (+) True G139998
TU176094 lncRNA downstream 394123 8958739 ~ 8960425 (+) True G139999
TU176097 lncRNA downstream 581685 9146301 ~ 9146572 (+) True G140002
AMCG00002982 mRNA upstream 57117 8493005 ~ 8496462 (+) True AMCG00002982
AMCG00002983 mRNA upstream 65786 8476692 ~ 8487793 (+) True AMCG00002983
AMCG00002977 mRNA upstream 319179 8229647 ~ 8234400 (+) True AMCG00002977
AMCG00002976 mRNA upstream 340484 8206391 ~ 8213095 (+) True AMCG00002976
AMCG00002973 mRNA upstream 381075 8136740 ~ 8172504 (+) True AMCG00002973
AMCG00002989 mRNA downstream 19878 8584494 ~ 8635277 (+) True AMCG00002989
AMCG00002990 mRNA downstream 77299 8641915 ~ 8642438 (+) True AMCG00002990
AMCG00002991 mRNA downstream 175122 8739738 ~ 8770076 (+) True AMCG00002991
AMCG00002992 mRNA downstream 230191 8794807 ~ 8817964 (+) True AMCG00002992
AMCG00002994 mRNA downstream 589348 9153964 ~ 9156135 (+) True AMCG00002994
TU175890 other upstream 509359 8037577 ~ 8044220 (+) True AMCG00002965
TU175799 other upstream 626747 7923182 ~ 7926832 (+) True G139784
TU175723 other upstream 1174092 7376687 ~ 7379487 (+) True G139720
TU175613 other upstream 1480043 7066943 ~ 7073536 (+) True AMCG00002939
TU175429 other upstream 2400459 6147748 ~ 6153120 (+) True G139492
TU176130 other downstream 736996 9301612 ~ 9304840 (+) True AMCG00002998
TU176137 other downstream 760872 9325488 ~ 9330464 (+) True G140030
TU176317 other downstream 1213634 9778250 ~ 9780452 (+) True G140189
TU176681 other downstream 2190285 10754901 ~ 10756840 (+) True G140478
TU176867 other downstream 2644957 11209573 ~ 11212111 (+) True G140613

Expression Profile