RNA id: AMCG00002988


Basic Information

Item Value
RNA id AMCG00002988
length 213
RNA type mRNA
GC content 0.37
exon number 2
gene id AMCG00002988
representative True

Chromosome Information

Item Value
chromosome id CM030139.1
NCBI id CM030139.1
chromosome length 23121578
location 8571588 ~ 8580373 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ATGaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagacatcCGCATGGTGGGCAGTGCCGTGGTTTTCATGA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU176008 lncRNA downstream 76291 8494854 ~ 8495297 (-) True G139937
TU175947 lncRNA downstream 337304 8230369 ~ 8234284 (-) True G139902
TU175950 lncRNA downstream 337304 8230369 ~ 8234284 (-) False G139902
TU175946 lncRNA downstream 340370 8230369 ~ 8231218 (-) False G139902
TU175922 lncRNA downstream 390012 8181290 ~ 8181576 (-) True G139881
TU176035 lncRNA upstream 37062 8617435 ~ 8618101 (-) True G139960
TU176102 lncRNA upstream 269296 8849669 ~ 8850559 (-) True G140005
TU176104 lncRNA upstream 352397 8932770 ~ 8932969 (-) True G140007
TU176107 lncRNA upstream 570443 9150816 ~ 9156562 (-) True G140009
TU176112 lncRNA upstream 655649 9236022 ~ 9236302 (-) True G140014
AMCG00002987 mRNA downstream 681 8570218 ~ 8570907 (-) True AMCG00002987
AMCG00002985 mRNA downstream 28628 8529195 ~ 8542960 (-) True AMCG00002985
AMCG00002986 mRNA downstream 63236 8505689 ~ 8508352 (-) True AMCG00002986
AMCG00002979 mRNA downstream 342459 8214896 ~ 8229129 (-) True AMCG00002979
AMCG00002980 mRNA downstream 368274 8198676 ~ 8203314 (-) True AMCG00002980
AMCG00002993 mRNA upstream 330062 8910435 ~ 8967149 (-) True AMCG00002993
AMCG00003001 mRNA upstream 693840 9274213 ~ 9281237 (-) True AMCG00003001
AMCG00002999 mRNA upstream 704176 9284549 ~ 9298719 (-) True AMCG00002999
AMCG00003000 mRNA upstream 745086 9325459 ~ 9346898 (-) True AMCG00003000
AMCG00003006 mRNA upstream 791000 9371373 ~ 9384002 (-) True AMCG00003006
TU176000 other downstream 76992 8485361 ~ 8494596 (-) True G139933
TU175851 other downstream 633347 7931257 ~ 7938241 (-) False AMCG00002970
TU175710 other downstream 1218767 7348811 ~ 7352821 (-) True AMCG00002945
TU175621 other downstream 1505267 7062473 ~ 7066321 (-) True AMCG00002935
TU174755 other downstream 4568784 4001650 ~ 4002804 (-) True G138932
TU176103 other upstream 266659 8847032 ~ 8847840 (-) True G140006
TU176114 other upstream 656285 9236658 ~ 9237730 (-) True G140015
TU176570 other upstream 1721427 10301800 ~ 10331372 (-) True AMCG00003049
TU177068 other upstream 3060443 11640816 ~ 11647619 (-) True G140758
TU177067 other upstream 3113633 11694006 ~ 11733762 (-) True G140757

Expression Profile