RNA id: AMCG00003003


Basic Information

Item Value
RNA id AMCG00003003
length 294
RNA type mRNA
GC content 0.47
exon number 2
gene id AMCG00003003
representative True

Chromosome Information

Item Value
chromosome id CM030139.1
NCBI id CM030139.1
chromosome length 23121578
location 9434060 ~ 9440740 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ATGATCCAGCAGCCTCACAAAGTGGCTACGTTCTTTGGCTGCATCGGCACAGATAATTTTGGCGCAATCCTGAAAAAGAAGGCGGAGGAGGCCCATGTTGATGCTCACTACTACGAACAGAGTGAAGAGCCAACAGGAACTTGTGCAGCCTGCATCACTGGCGACAACAGGTCCCTTGTTGCCAACCTTGCAGCAGCAAACtgttacaaaaaggaaaatcatcTGGACCTGGAGGAGAACTGGAAATTGGTGGAAAAAGCCAAAATCTATTACATCGCAGTAAGTGTATTGTCT

Function

GO: NA

KEGG:

id description
K00856 E2.7.1.20, ADK; adenosine kinase

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU176115 lncRNA downstream 191073 9237868 ~ 9242987 (-) True G140016
TU176112 lncRNA downstream 197758 9236022 ~ 9236302 (-) True G140014
TU176107 lncRNA downstream 277498 9150816 ~ 9156562 (-) True G140009
TU176104 lncRNA downstream 501091 8932770 ~ 8932969 (-) True G140007
TU176102 lncRNA downstream 583501 8849669 ~ 8850559 (-) True G140005
TU176214 lncRNA upstream 99604 9540344 ~ 9540553 (-) True G140093
TU176247 lncRNA upstream 156203 9596943 ~ 9607316 (-) True AMCG00003017
TU176248 lncRNA upstream 160468 9601208 ~ 9607316 (-) False AMCG00003017
TU176301 lncRNA upstream 299914 9740654 ~ 9740940 (-) True G140174
TU176327 lncRNA upstream 324913 9765653 ~ 9771507 (-) True G140199
AMCG00003006 mRNA downstream 50058 9371373 ~ 9384002 (-) True AMCG00003006
AMCG00003000 mRNA downstream 87162 9325459 ~ 9346898 (-) True AMCG00003000
AMCG00002999 mRNA downstream 135341 9284549 ~ 9298719 (-) True AMCG00002999
AMCG00003001 mRNA downstream 152823 9274213 ~ 9281237 (-) True AMCG00003001
AMCG00002993 mRNA downstream 466911 8910435 ~ 8967149 (-) True AMCG00002993
AMCG00003004 mRNA upstream 60505 9501245 ~ 9524893 (-) True AMCG00003004
AMCG00003005 mRNA upstream 105258 9545998 ~ 9554667 (-) True AMCG00003005
AMCG00003017 mRNA upstream 160033 9600773 ~ 9607215 (-) False AMCG00003017
AMCG00003012 mRNA upstream 167042 9607782 ~ 9621040 (-) True AMCG00003012
AMCG00003010 mRNA upstream 181140 9621880 ~ 9629686 (-) True AMCG00003010
TU176114 other downstream 196330 9236658 ~ 9237730 (-) True G140015
TU176103 other downstream 586220 8847032 ~ 8847840 (-) True G140006
TU176000 other downstream 939464 8485361 ~ 8494596 (-) True G139933
TU175851 other downstream 1495819 7931257 ~ 7938241 (-) False AMCG00002970
TU175710 other downstream 2081239 7348811 ~ 7352821 (-) True AMCG00002945
TU176570 other upstream 861060 10301800 ~ 10331372 (-) True AMCG00003049
TU177068 other upstream 2200076 11640816 ~ 11647619 (-) True G140758
TU177067 other upstream 2253266 11694006 ~ 11733762 (-) True G140757
TU177331 other upstream 3410281 12851021 ~ 12855341 (-) False AMCG00003144
TU177332 other upstream 3410281 12851021 ~ 12855341 (-) False AMCG00003144

Expression Profile