Gene
RNA
| Item | Value |
|---|---|
| RNA id | AMCG00003050 |
| length | 501 |
| RNA type | mRNA |
| GC content | 0.54 |
| exon number | 1 |
| gene id | AMCG00003050 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030139.1 |
| NCBI id | CM030139.1 |
| chromosome length | 23121578 |
| location | 10325714 ~ 10326214 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | name | namespace |
|---|---|---|
| GO:0005634 | nucleus | cellular_component |
| GO:0016021 | integral component of membrane | cellular_component |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU176516 | lncRNA | upstream | 35779 | 10288437 ~ 10289935 (+) | True | G140351 |
| TU176503 | lncRNA | upstream | 74189 | 10247835 ~ 10251525 (+) | True | G140340 |
| TU176494 | lncRNA | upstream | 88631 | 10234835 ~ 10237083 (+) | True | G140331 |
| TU176409 | lncRNA | upstream | 295191 | 10030226 ~ 10030523 (+) | True | G140269 |
| TU176408 | lncRNA | upstream | 300565 | 10024939 ~ 10025149 (+) | True | G140268 |
| TU176623 | lncRNA | downstream | 298549 | 10624763 ~ 10627882 (+) | True | G140434 |
| TU176624 | lncRNA | downstream | 306049 | 10632263 ~ 10632489 (+) | True | G140435 |
| TU176625 | lncRNA | downstream | 327119 | 10653333 ~ 10656991 (+) | True | G140436 |
| TU176631 | lncRNA | downstream | 354557 | 10680771 ~ 10683612 (+) | True | AMCG00003066 |
| TU176865 | lncRNA | downstream | 881292 | 11207506 ~ 11209502 (+) | True | G140612 |
| AMCG00003051 | mRNA | upstream | 7915 | 10309072 ~ 10317799 (+) | True | AMCG00003051 |
| AMCG00003045 | mRNA | upstream | 37620 | 10286155 ~ 10288094 (+) | True | AMCG00003045 |
| AMCG00003044 | mRNA | upstream | 39659 | 10261340 ~ 10286055 (+) | True | AMCG00003044 |
| AMCG00003043 | mRNA | upstream | 99683 | 10195537 ~ 10226031 (+) | True | AMCG00003043 |
| AMCG00003030 | mRNA | upstream | 144072 | 10176642 ~ 10181642 (+) | True | AMCG00003030 |
| AMCG00003053 | mRNA | downstream | 136062 | 10462276 ~ 10484842 (+) | True | AMCG00003053 |
| AMCG00003058 | mRNA | downstream | 217255 | 10543469 ~ 10565618 (+) | True | AMCG00003058 |
| AMCG00003057 | mRNA | downstream | 286292 | 10612506 ~ 10622148 (+) | True | AMCG00003057 |
| AMCG00003066 | mRNA | downstream | 354801 | 10681015 ~ 10683612 (+) | False | AMCG00003066 |
| AMCG00003065 | mRNA | downstream | 360056 | 10686270 ~ 10693974 (+) | True | AMCG00003065 |
| TU176317 | other | upstream | 545262 | 9778250 ~ 9780452 (+) | True | G140189 |
| TU176137 | other | upstream | 995250 | 9325488 ~ 9330464 (+) | True | G140030 |
| TU176130 | other | upstream | 1020874 | 9301612 ~ 9304840 (+) | True | AMCG00002998 |
| TU175890 | other | upstream | 2281494 | 8037577 ~ 8044220 (+) | True | AMCG00002965 |
| TU175799 | other | upstream | 2398882 | 7923182 ~ 7926832 (+) | True | G139784 |
| TU176681 | other | downstream | 428687 | 10754901 ~ 10756840 (+) | True | G140478 |
| TU176867 | other | downstream | 883359 | 11209573 ~ 11212111 (+) | True | G140613 |
| TU176980 | other | downstream | 1159977 | 11486191 ~ 11487884 (+) | True | G140693 |
| TU177209 | other | downstream | 2047752 | 12373966 ~ 12374360 (+) | False | AMCG00003129 |
| TU177286 | other | downstream | 2404517 | 12730731 ~ 12739767 (+) | True | G140939 |
