RNA id: AMCG00003063


Basic Information

Item Value
RNA id AMCG00003063
length 420
RNA type mRNA
GC content 0.57
exon number 4
gene id AMCG00003063
representative True

Chromosome Information

Item Value
chromosome id CM030139.1
NCBI id CM030139.1
chromosome length 23121578
location 10574632 ~ 10578103 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ATGTGTCTTGCTCAGATTGGAGAGATCTTAGGGGAAGTCTGCTGGAAGGAGCCCCAGGGTCAGGGTGAAGGCTGGCGTTATCTGATTCAGGCCCTGCAGAAAGGAGAGCAGTCGGTGATAGAGAAAGGGAGAGTGAGTGAAGCGAAGCGAGGAGGTTTTGGGCCTAGCGACATAGACGAGTGCTCTCGGGGCCTCAGCGAGTGCAATCAGAAATGTCTCAACACTCAGGGGTCCTTCTCCTGTCACTGCCATCCCGGGTACAGACTCACTGTGTCTGGCCAATGTGTGGATGTGGACGAGTGTCAGGAGCAGGCCGGAGCGTGTGAGCATGTCTGCCACAATGAGCGCGGTTCCTTCCACTGCCACTGTCACCCAGGCTTCAATCTGGCCAACGACCAGCGCCGATGCCAGAGAGCCTAG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU176545 lncRNA downstream 235372 10221780 ~ 10339260 (-) True G140368
TU176422 lncRNA downstream 536775 10036178 ~ 10037857 (-) True G140279
TU176363 lncRNA downstream 685006 9889158 ~ 9889626 (-) True G140228
TU176347 lncRNA downstream 721219 9848895 ~ 9853413 (-) True G140217
TU176655 lncRNA upstream 44503 10622606 ~ 10623742 (-) True G140456
TU176659 lncRNA upstream 75222 10653325 ~ 10656997 (-) True G140458
TU176739 lncRNA upstream 240666 10818769 ~ 10819159 (-) True G140521
TU176757 lncRNA upstream 348015 10926118 ~ 10929972 (-) True G140537
TU176774 lncRNA upstream 387429 10965532 ~ 10967602 (-) True G140546
AMCG00003055 mRNA downstream 4094 10563253 ~ 10570538 (-) True AMCG00003055
AMCG00003054 mRNA downstream 55148 10517867 ~ 10519484 (-) True AMCG00003054
AMCG00003056 mRNA downstream 63203 10498202 ~ 10511429 (-) True AMCG00003056
AMCG00003052 mRNA downstream 129428 10420188 ~ 10445204 (-) True AMCG00003052
AMCG00003046 mRNA downstream 250935 10318878 ~ 10323697 (-) True AMCG00003046
AMCG00003060 mRNA upstream 3290 10581393 ~ 10600651 (-) True AMCG00003060
AMCG00003059 mRNA upstream 46857 10624960 ~ 10647910 (-) True AMCG00003059
AMCG00003062 mRNA upstream 78958 10657061 ~ 10662103 (-) True AMCG00003062
AMCG00003061 mRNA upstream 92402 10670505 ~ 10679832 (-) True AMCG00003061
AMCG00003067 mRNA upstream 116489 10694592 ~ 10700613 (-) True AMCG00003067
TU176570 other downstream 243260 10301800 ~ 10331372 (-) True AMCG00003049
TU176114 other downstream 1336902 9236658 ~ 9237730 (-) True G140015
TU176103 other downstream 1726792 8847032 ~ 8847840 (-) True G140006
TU176000 other downstream 2080036 8485361 ~ 8494596 (-) True G139933
TU175851 other downstream 2636391 7931257 ~ 7938241 (-) False AMCG00002970
TU177068 other upstream 1062713 11640816 ~ 11647619 (-) True G140758
TU177067 other upstream 1115903 11694006 ~ 11733762 (-) True G140757
TU177331 other upstream 2272918 12851021 ~ 12855341 (-) False AMCG00003144
TU177332 other upstream 2272918 12851021 ~ 12855341 (-) False AMCG00003144
TU177333 other upstream 2272918 12851021 ~ 12855341 (-) False AMCG00003144

Expression Profile