RNA id: AMCG00003067


Basic Information

Item Value
RNA id AMCG00003067
length 2486
RNA type mRNA
GC content 0.54
exon number 12
gene id AMCG00003067
representative True

Chromosome Information

Item Value
chromosome id CM030139.1
NCBI id CM030139.1
chromosome length 23121578
location 10694592 ~ 10700613 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

cacacacacacacacacacacacacacacactgtactgtagtacacagtttaatgtacGTGTTCCTTGTTTGTGATTGTCTGccatttttgtttgctgtgaaacaggaagtggagGTCGATAAGCCGTCTGTCCGCCGTGATTTGCAATAGCTAAATGAACAAACCGTTGGCTTTTCAAAACTTCTCGATCGCTTTGTTAACCACTACCAGTAATGTCCGCGTTTGAGTGGTGCTGTGTGAGAGACACGTAGTCTGCTCTGAAGTGCTTGCCTTTCTTTGCATGTCCTGTCCTGCCACAGTCCGCGTAAGACCGGCGAGTCCGGGGAACAGAGCAGCTGCGGCCACGTCGTCAGGGACCATGAGGAGGTGACAGTGACAGCCTGGACATATGGCAAGGCTCAGTTTCTCCTGCCTCCTGCCAGCTTCCTGGCACTTCAGCGTGTCCCCGTTCTCTCTGGGAGTCACACCACGCCAACGCCTTGTCTTCCTGGCCTTCTTCCTGGCCTGCTTCCTGCTGCTGTTCCTGGCCATGCTGCATACACACCGCTGGAGCCCGGCGCACAGGGCTGGCCAGCTAGACAAGTATATGTCCATTATTGAGACTATGGAGGCCACTGACATTGCCAATCCGAGCCTGAACTTCGGAGTAGTGGTGGATTGTGGCAGCAGTGGTTCACGAGTCTTTGTCTACTACTGGCCCCCCCACAATGGAAACCCCCACTCACTGCTCGACATCCGGCAGATGAGGGACCACAACCGTACCCCGGTGGTCAAGAAAATCAAACCAGGTATATCCACTCTGGCCCACACCCCTGACAAAGCCAGCGATTATCTCCAACCTCTCCTGAAGTTCGCAGCTGAACACATCCCCAAAAAGAAGCACAAAGAGACACCTCTGTATATCCTATGCACAGCGGGAATGAGGCTGCTGTCAGAGAGCCAGCAGGGGGCAATCCTGAAGGATCTGTTCACAGATGTGCCCCTCGAGTTTGATTTCCTGTTTTCCAGCTCCCATGCGGAGGTCATCTCCGGAAAACAGGAAGGAGTGTATGCATGGATTGGTATTAACTTTGTGCTTGGCCGCTTTGACCACGCAGAAGAGGGGGATGATGCTGTGGTTGCCGTTTCAACTGGAACACAAAACCAACAGCCAATCAGCCGCAAGCGCACAGTGGGCATTATTGACATGGGTGGGGCCTCGCTGCAAATCGCATATGAGGTGCCCAGTGCGATTACCTTCAGCTCACCTGAGCAGGAAAACGCGGCAAAGACCCTGCTGGCTGAGTTTAACCTGGGCTGCGATGTTGAGCACACTCAGCACGTCTACCGCGTCTATGTCACCACTTTCTTGGGCTTCGGAGGCAATATGGCCCGGCAGCGCTATGAGGACTTCCTGGTCAACAGGACGGTCTCCAGGAGCAGGTTAACAGGTGATCAGACTGGGATAAGTGCCTCCAGCCCTTACTCCGACCCCTGCCTGCCCGTCGGCCTGGAAGACTCGGTGCAGCGCGATGAGCAGACGGTGTTCCTGCGTGGCCACGGGGACTGGCTTAAGTGCCAGGAAGTTGTGCGGCCCTTCCTGGGACAGCCCAACACCTCCGCCTCCCTCCTGAGGGTGTATCGGGCCCCCGTGGACTTCCACAACAGCGAGTTCTACGGCTTCTCCGAGTTCTACTACTGCACGGAGGACGTGCTGCGGATCGGGGGCAACTATGACAGCGCCAAGTACGCCAGAGCCGCCAGGGATTATTGTGCCACCAAGTGGTCAACCCTAACACAGCGACTGGACAGCAAACTCTACTCCTCTCAGGCTGATATCTCCAGATTAAAATACCAGTGCTTTAAATCTGCATGGATGTATGAAGTGCTGCACTCTGGATTTAAATTTCCTAAGGATTATCCCAGCTTGAAGACTGCACAGCTGGTCTATGACAAAGAGGTGCAGTGGACTCTGGGGGCTATTCTCTTTAAAACACGTTTCCTGCCTCTCAGGGACCTTCAGCAGGAGGCATTCCGCCCGTCTCATTCCAGCTGGCCGCGCTTCTCATTCGTTTATAACCACTACCTGTTCCTCGCCTGCATCCTGGTGGTGCTCTTGGCCATCCTGCTCTACATCCTGCGCCTCCGACGCATCCACCGGCGAGAGCAGCGCCAGGCCGAGACTCTGGACCTGCTGTGGGTGGAGGAGGGCGAGCCTCTCACTGGCTGAGGACGGGAGGGGTGCCGGAGCCACGTCTCCTCAGGGTCCCTGGGCTGCTACTGCTTTGAGGGGAACCTGAAGTTCTACTGCCTGTTTACCAGAAGATGCACAGAGGTGGTTACATCGTAAAGGAGTTTGAGAAGGACTAGGGTGATGTACAGGTTTGGGAAAAGACCACCAGATGATGAAAACTGAATCACTTTAGATCTGCATCTCTTTCTGCAGATCACCCAATTATTCCATTTCAGGAATGACTGgatcttaattttaaattattaaatgagg

Function

GO:

id name namespace
GO:0008152 metabolic process biological_process
GO:0016787 hydrolase activity molecular_function

KEGG:

id description
K14643 ENTPD7; ectonucleoside triphosphate diphosphohydrolase 7

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU176659 lncRNA downstream 37595 10653325 ~ 10656997 (-) True G140458
TU176655 lncRNA downstream 70850 10622606 ~ 10623742 (-) True G140456
TU176545 lncRNA downstream 355332 10221780 ~ 10339260 (-) True G140368
TU176422 lncRNA downstream 656735 10036178 ~ 10037857 (-) True G140279
TU176363 lncRNA downstream 804966 9889158 ~ 9889626 (-) True G140228
TU176739 lncRNA upstream 118156 10818769 ~ 10819159 (-) True G140521
TU176757 lncRNA upstream 225505 10926118 ~ 10929972 (-) True G140537
TU176774 lncRNA upstream 264919 10965532 ~ 10967602 (-) True G140546
TU176798 lncRNA upstream 310525 11011138 ~ 11037311 (-) True G140567
TU176821 lncRNA upstream 406783 11107396 ~ 11107604 (-) True G140588
AMCG00003061 mRNA downstream 14760 10670505 ~ 10679832 (-) True AMCG00003061
AMCG00003062 mRNA downstream 32489 10657061 ~ 10662103 (-) True AMCG00003062
AMCG00003059 mRNA downstream 46682 10624960 ~ 10647910 (-) True AMCG00003059
AMCG00003060 mRNA downstream 93941 10581393 ~ 10600651 (-) True AMCG00003060
AMCG00003063 mRNA downstream 116489 10574632 ~ 10578103 (-) True AMCG00003063
AMCG00003068 mRNA upstream 30329 10730942 ~ 10743690 (-) True AMCG00003068
AMCG00003069 mRNA upstream 55528 10756141 ~ 10758646 (-) True AMCG00003069
AMCG00003071 mRNA upstream 93441 10794054 ~ 10807733 (-) True AMCG00003071
AMCG00003080 mRNA upstream 207379 10907992 ~ 10912581 (-) True AMCG00003080
AMCG00003078 mRNA upstream 218536 10919149 ~ 10923578 (-) True AMCG00003078
TU176570 other downstream 363220 10301800 ~ 10331372 (-) True AMCG00003049
TU176114 other downstream 1456862 9236658 ~ 9237730 (-) True G140015
TU176103 other downstream 1846752 8847032 ~ 8847840 (-) True G140006
TU176000 other downstream 2199996 8485361 ~ 8494596 (-) True G139933
TU175851 other downstream 2756351 7931257 ~ 7938241 (-) False AMCG00002970
TU177068 other upstream 940203 11640816 ~ 11647619 (-) True G140758
TU177067 other upstream 993393 11694006 ~ 11733762 (-) True G140757
TU177331 other upstream 2150408 12851021 ~ 12855341 (-) False AMCG00003144
TU177332 other upstream 2150408 12851021 ~ 12855341 (-) False AMCG00003144
TU177333 other upstream 2150408 12851021 ~ 12855341 (-) False AMCG00003144

Expression Profile