Gene
RNA
| Item | Value |
|---|---|
| RNA id | AMCG00003077 |
| length | 516 |
| RNA type | mRNA |
| GC content | 0.52 |
| exon number | 5 |
| gene id | AMCG00003077 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030139.1 |
| NCBI id | CM030139.1 |
| chromosome length | 23121578 |
| location | 10866639 ~ 10881830 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | name | namespace |
|---|---|---|
| GO:0030145 | manganese ion binding | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU176631 | lncRNA | upstream | 183027 | 10680771 ~ 10683612 (+) | True | AMCG00003066 |
| TU176625 | lncRNA | upstream | 209648 | 10653333 ~ 10656991 (+) | True | G140436 |
| TU176624 | lncRNA | upstream | 234150 | 10632263 ~ 10632489 (+) | True | G140435 |
| TU176623 | lncRNA | upstream | 238757 | 10624763 ~ 10627882 (+) | True | G140434 |
| TU176516 | lncRNA | upstream | 576704 | 10288437 ~ 10289935 (+) | True | G140351 |
| TU176865 | lncRNA | downstream | 325676 | 11207506 ~ 11209502 (+) | True | G140612 |
| TU176900 | lncRNA | downstream | 363426 | 11245256 ~ 11247278 (+) | True | G140632 |
| TU176979 | lncRNA | downstream | 598975 | 11480805 ~ 11481037 (+) | True | G140692 |
| TU176981 | lncRNA | downstream | 606400 | 11488230 ~ 11490662 (+) | True | G140694 |
| TU177027 | lncRNA | downstream | 655817 | 11537647 ~ 11537954 (+) | True | G140723 |
| AMCG00003076 | mRNA | upstream | 4523 | 10860698 ~ 10862116 (+) | True | AMCG00003076 |
| AMCG00003075 | mRNA | upstream | 41706 | 10818904 ~ 10824933 (+) | True | AMCG00003075 |
| AMCG00003070 | mRNA | upstream | 79084 | 10781001 ~ 10787555 (+) | True | AMCG00003070 |
| AMCG00003064 | mRNA | upstream | 146701 | 10705633 ~ 10719938 (+) | True | AMCG00003064 |
| AMCG00003065 | mRNA | upstream | 172665 | 10686270 ~ 10693974 (+) | True | AMCG00003065 |
| AMCG00003073 | mRNA | downstream | 18985 | 10900815 ~ 10907710 (+) | True | AMCG00003073 |
| AMCG00003074 | mRNA | downstream | 33787 | 10915617 ~ 10918044 (+) | True | AMCG00003074 |
| AMCG00003072 | mRNA | downstream | 40766 | 10922596 ~ 10941584 (+) | True | AMCG00003072 |
| AMCG00003084 | mRNA | downstream | 78149 | 10959979 ~ 10961493 (+) | True | AMCG00003084 |
| AMCG00003086 | mRNA | downstream | 81376 | 10963206 ~ 10967428 (+) | True | AMCG00003086 |
| TU176681 | other | upstream | 109799 | 10754901 ~ 10756840 (+) | True | G140478 |
| TU176317 | other | upstream | 1086187 | 9778250 ~ 9780452 (+) | True | G140189 |
| TU176137 | other | upstream | 1536175 | 9325488 ~ 9330464 (+) | True | G140030 |
| TU176130 | other | upstream | 1561799 | 9301612 ~ 9304840 (+) | True | AMCG00002998 |
| TU175890 | other | upstream | 2822419 | 8037577 ~ 8044220 (+) | True | AMCG00002965 |
| TU176867 | other | downstream | 327743 | 11209573 ~ 11212111 (+) | True | G140613 |
| TU176980 | other | downstream | 604361 | 11486191 ~ 11487884 (+) | True | G140693 |
| TU177209 | other | downstream | 1492136 | 12373966 ~ 12374360 (+) | False | AMCG00003129 |
| TU177286 | other | downstream | 1848901 | 12730731 ~ 12739767 (+) | True | G140939 |
| TU177338 | other | downstream | 1996855 | 12878685 ~ 12882998 (+) | True | AMCG00003141 |
