Gene
RNA
| Item | Value |
|---|---|
| RNA id | AMCG00003089 |
| length | 1140 |
| RNA type | mRNA |
| GC content | 0.52 |
| exon number | 5 |
| gene id | AMCG00003089 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030139.1 |
| NCBI id | CM030139.1 |
| chromosome length | 23121578 |
| location | 11040337 ~ 11047762 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | name | namespace |
|---|---|---|
| GO:0007217 | tachykinin receptor signaling pathway | biological_process |
| GO:0007218 | neuropeptide signaling pathway | biological_process |
| GO:0007268 | chemical synaptic transmission | biological_process |
| GO:0005886 | plasma membrane | cellular_component |
| GO:0016021 | integral component of membrane | cellular_component |
| GO:0004995 | tachykinin receptor activity | molecular_function |
| id | description |
|---|---|
| K04224 | TACR3; tachykinin receptor 3 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU176798 | lncRNA | downstream | 3026 | 11011138 ~ 11037311 (-) | True | G140567 |
| TU176774 | lncRNA | downstream | 72735 | 10965532 ~ 10967602 (-) | True | G140546 |
| TU176757 | lncRNA | downstream | 110365 | 10926118 ~ 10929972 (-) | True | G140537 |
| TU176739 | lncRNA | downstream | 221178 | 10818769 ~ 10819159 (-) | True | G140521 |
| TU176659 | lncRNA | downstream | 383340 | 10653325 ~ 10656997 (-) | True | G140458 |
| TU176821 | lncRNA | upstream | 59634 | 11107396 ~ 11107604 (-) | True | G140588 |
| TU176917 | lncRNA | upstream | 185906 | 11233668 ~ 11308389 (-) | False | G140648 |
| TU176916 | lncRNA | upstream | 257709 | 11305471 ~ 11308389 (-) | True | G140648 |
| TU176996 | lncRNA | upstream | 284667 | 11332429 ~ 11333684 (-) | True | G140704 |
| TU177049 | lncRNA | upstream | 550296 | 11598058 ~ 11599956 (-) | True | G140742 |
| AMCG00003079 | mRNA | downstream | 83936 | 10954588 ~ 10956401 (-) | True | AMCG00003079 |
| AMCG00003081 | mRNA | downstream | 88900 | 10945019 ~ 10951437 (-) | True | AMCG00003081 |
| AMCG00003078 | mRNA | downstream | 116759 | 10919149 ~ 10923578 (-) | True | AMCG00003078 |
| AMCG00003080 | mRNA | downstream | 127756 | 10907992 ~ 10912581 (-) | True | AMCG00003080 |
| AMCG00003071 | mRNA | downstream | 232604 | 10794054 ~ 10807733 (-) | True | AMCG00003071 |
| AMCG00003106 | mRNA | upstream | 90435 | 11138197 ~ 11166902 (-) | True | AMCG00003106 |
| AMCG00003097 | mRNA | upstream | 122778 | 11170540 ~ 11175031 (-) | True | AMCG00003097 |
| AMCG00003104 | mRNA | upstream | 159711 | 11207473 ~ 11224433 (-) | True | AMCG00003104 |
| AMCG00003099 | mRNA | upstream | 177473 | 11225235 ~ 11230377 (-) | True | AMCG00003099 |
| AMCG00003098 | mRNA | upstream | 193009 | 11240771 ~ 11251621 (-) | True | AMCG00003098 |
| TU176570 | other | downstream | 708965 | 10301800 ~ 10331372 (-) | True | AMCG00003049 |
| TU176114 | other | downstream | 1802607 | 9236658 ~ 9237730 (-) | True | G140015 |
| TU176103 | other | downstream | 2192497 | 8847032 ~ 8847840 (-) | True | G140006 |
| TU176000 | other | downstream | 2545741 | 8485361 ~ 8494596 (-) | True | G139933 |
| TU175851 | other | downstream | 3102096 | 7931257 ~ 7938241 (-) | False | AMCG00002970 |
| TU177068 | other | upstream | 593054 | 11640816 ~ 11647619 (-) | True | G140758 |
| TU177067 | other | upstream | 646244 | 11694006 ~ 11733762 (-) | True | G140757 |
| TU177331 | other | upstream | 1803259 | 12851021 ~ 12855341 (-) | False | AMCG00003144 |
| TU177332 | other | upstream | 1803259 | 12851021 ~ 12855341 (-) | False | AMCG00003144 |
| TU177333 | other | upstream | 1803259 | 12851021 ~ 12855341 (-) | False | AMCG00003144 |
