Gene
RNA
| Item | Value |
|---|---|
| RNA id | AMCG00003090 |
| length | 1067 |
| RNA type | mRNA |
| GC content | 0.53 |
| exon number | 10 |
| gene id | AMCG00003090 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030139.1 |
| NCBI id | CM030139.1 |
| chromosome length | 23121578 |
| location | 11146588 ~ 11154101 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | name | namespace |
|---|---|---|
| GO:0030145 | manganese ion binding | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU176631 | lncRNA | upstream | 462976 | 10680771 ~ 10683612 (+) | True | AMCG00003066 |
| TU176625 | lncRNA | upstream | 489597 | 10653333 ~ 10656991 (+) | True | G140436 |
| TU176624 | lncRNA | upstream | 514099 | 10632263 ~ 10632489 (+) | True | G140435 |
| TU176623 | lncRNA | upstream | 518706 | 10624763 ~ 10627882 (+) | True | G140434 |
| TU176516 | lncRNA | upstream | 856653 | 10288437 ~ 10289935 (+) | True | G140351 |
| TU176865 | lncRNA | downstream | 53405 | 11207506 ~ 11209502 (+) | True | G140612 |
| TU176900 | lncRNA | downstream | 91155 | 11245256 ~ 11247278 (+) | True | G140632 |
| TU176979 | lncRNA | downstream | 326704 | 11480805 ~ 11481037 (+) | True | G140692 |
| TU176981 | lncRNA | downstream | 334129 | 11488230 ~ 11490662 (+) | True | G140694 |
| TU177027 | lncRNA | downstream | 383546 | 11537647 ~ 11537954 (+) | True | G140723 |
| AMCG00003091 | mRNA | upstream | 6762 | 11118965 ~ 11139826 (+) | True | AMCG00003091 |
| AMCG00003092 | mRNA | upstream | 41235 | 11052987 ~ 11105353 (+) | True | AMCG00003092 |
| AMCG00003085 | mRNA | upstream | 107260 | 11019042 ~ 11039328 (+) | True | AMCG00003085 |
| AMCG00003088 | mRNA | upstream | 131463 | 11003963 ~ 11015125 (+) | True | AMCG00003088 |
| AMCG00003087 | mRNA | upstream | 144495 | 10995305 ~ 11002093 (+) | True | AMCG00003087 |
| AMCG00003096 | mRNA | downstream | 79347 | 11233448 ~ 11239304 (+) | True | AMCG00003096 |
| AMCG00003094 | mRNA | downstream | 146216 | 11300317 ~ 11307482 (+) | True | AMCG00003094 |
| AMCG00003093 | mRNA | downstream | 155589 | 11309690 ~ 11331126 (+) | True | AMCG00003093 |
| AMCG00003095 | mRNA | downstream | 177284 | 11331385 ~ 11356730 (+) | True | AMCG00003095 |
| AMCG00003108 | mRNA | downstream | 348926 | 11503027 ~ 11504004 (+) | True | AMCG00003108 |
| TU176681 | other | upstream | 389748 | 10754901 ~ 10756840 (+) | True | G140478 |
| TU176317 | other | upstream | 1366136 | 9778250 ~ 9780452 (+) | True | G140189 |
| TU176137 | other | upstream | 1816124 | 9325488 ~ 9330464 (+) | True | G140030 |
| TU176130 | other | upstream | 1841748 | 9301612 ~ 9304840 (+) | True | AMCG00002998 |
| TU175890 | other | upstream | 3102368 | 8037577 ~ 8044220 (+) | True | AMCG00002965 |
| TU176867 | other | downstream | 55472 | 11209573 ~ 11212111 (+) | True | G140613 |
| TU176980 | other | downstream | 332090 | 11486191 ~ 11487884 (+) | True | G140693 |
| TU177209 | other | downstream | 1219865 | 12373966 ~ 12374360 (+) | False | AMCG00003129 |
| TU177286 | other | downstream | 1576630 | 12730731 ~ 12739767 (+) | True | G140939 |
| TU177338 | other | downstream | 1724584 | 12878685 ~ 12882998 (+) | True | AMCG00003141 |
