RNA id: AMCG00003122


Basic Information

Item Value
RNA id AMCG00003122
length 1643
RNA type mRNA
GC content 0.51
exon number 12
gene id AMCG00003122
representative True

Chromosome Information

Item Value
chromosome id CM030139.1
NCBI id CM030139.1
chromosome length 23121578
location 12002034 ~ 12012016 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

CCGGCAGCCCGTCGGTCCTCCCGGTGACTCTCAGTGACTCCCGGTGACTCCCGGCACGGCAGTGCGGCGCCCAGCGACACACAGCCCGCCATCCGCATCCCGACATGTCCTACACCGGCTTTTTGAGCAGCAGCCGGGTTTCCAAGGAAGAGCGCGAGTTTTACGAGCTGAAGCACAGAGCTGCCGAATACTACCGAGCCAACGGAGTGCCACAGAAAATGGAGGCTGTGCTCAACTCCATGTTTTACGACAAGCCCGACGATGTGTGCGGGTATTTGgCAAACTATTTTTCAAGTTTCTCAAAACCGCCCGTGATTCACAGACTGTTGGGAAAAGAAGTGTACGATGGAAAAGGGCACCCAACAGTGCAAGCAGAAGTTCTGTGCATTGTCAGCAATGTAGAGAAGTGGAAGTGTCATTTGTGTTGCAGTGATTTTCTGGCTGCACGCATGTTAGAAGAGCAGGACAGACAGAGGCGAGAACAGGAAGACGGGCAACTTGATGACCCTGCACCTGCACCCACCCCACCTGCCCAGCCACCCCCAGCCAGcaaagagaaaaagacaagTGCCAAAGGGAAAAAGGGTGCTACTGTAGAGAAGCCAATTCCACCGGCAGAAGTCCCAGAGCCAGTGCTACCAGGCTGCATGGCCATAGGGGCAGTGTCTCTCGCAGTGGccaaaactgcagctcactTCAAAGGCATTCCCCTCTACCAGCACATCTCTGCACTGAAACAGGGCCAGCAGTCTACCAGAGAGCTCCATATCCCATTGCCCATGGTGACTGTGCTGTCCTGCGGGAAATCATCACCTGGGAAACTGAACCTTATGGAGGAAATAATTGTTATCCCAAAACCTGCACAACCATTTAAACAGAGCTTTAAAGTCCTACTTGATCTACGAAAGGAGATTACAAGAATGATTAACGCAAACTCCAAAACAGGGCCTGTGGCAAATACAGTTTCAGATGCTGGAGCCCTGGTAATAGGATATGACCGTCTTGAGCAGCCATTGGACGTTATTTCTGAGGCCTCTAACACCCTTGGACTGTCACTTGGCAGTGACATACATTTAGCAATAAACTGTGCTGCCCACAAGCTTATGGACTATCAAAAAGGCAAATACGAAGTGAGCACTGGAACCTGCAAGTCTCCCGATGAAATGGTGAACGTGTATCTGGATTTGACAAGCAGATACCCAGGAGTTATCGCTCTGATAGATCCTTTGAGGAAAGAGGATCAGGAACAGTGGGAGACACTGTACAGGGCTCTTGGCTCCAGATGTTATCTAGTTGCTGAAGCAGCATCACTACCTATCTGTTCACTCCTGGCTGAGGAGAACCTGACCATACCTGGGGTCAGTGGTCTGACCATGAAACAGACCAACCAGACAACTGTCTCCGACCTGATCCAAATCACAACACGACTGGAAGATCAGAAGTGCCTGACTGTCATTGGGACAACGGACGGAGAACCCTGTGACGACGCTCTCTCAGACCTGGCTGTTGGTTTGGGAGTTCGGTTTGTCAAACTGGGAGGTCTGTGTCATGGAGAGAGGGTGACTAAATACAGCCGTCTGATTTCTATAGAGGAAGAATTGGCTCAGCAGGGAATACTGGGTTCACAAGGCGATAACATCTAA

Function

GO: NA

KEGG:

id description
K01689 ENO, eno; enolase

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU177044 lncRNA upstream 368509 11631963 ~ 11633525 (+) True G140738
TU177027 lncRNA upstream 464080 11537647 ~ 11537954 (+) True G140723
TU176981 lncRNA upstream 511372 11488230 ~ 11490662 (+) True G140694
TU176979 lncRNA upstream 520997 11480805 ~ 11481037 (+) True G140692
TU176900 lncRNA upstream 754756 11245256 ~ 11247278 (+) True G140632
TU177186 lncRNA downstream 142797 12154813 ~ 12158751 (+) True G140857
TU177201 lncRNA downstream 274031 12286047 ~ 12286276 (+) True G140872
TU177208 lncRNA downstream 359983 12371999 ~ 12373831 (+) False AMCG00003129
TU177211 lncRNA downstream 372660 12384676 ~ 12385070 (+) False AMCG00003129
TU177315 lncRNA downstream 809859 12821875 ~ 12824630 (+) True G140961
AMCG00003116 mRNA upstream 71933 11924327 ~ 11930101 (+) True AMCG00003116
AMCG00003115 mRNA upstream 90528 11897960 ~ 11911506 (+) True AMCG00003115
AMCG00003112 mRNA upstream 195678 11803011 ~ 11806356 (+) True AMCG00003112
AMCG00003111 mRNA upstream 204975 11786422 ~ 11797059 (+) True AMCG00003111
AMCG00003107 mRNA upstream 401992 11571865 ~ 11600042 (+) True AMCG00003107
AMCG00003120 mRNA downstream 110028 12122044 ~ 12130905 (+) True AMCG00003120
AMCG00003121 mRNA downstream 122109 12134125 ~ 12153351 (+) True AMCG00003121
AMCG00003125 mRNA downstream 222541 12234557 ~ 12239380 (+) True AMCG00003125
AMCG00003129 mRNA downstream 361802 12373818 ~ 12678159 (+) True AMCG00003129
AMCG00003128 mRNA downstream 669726 12681742 ~ 12682422 (+) True AMCG00003128
TU176980 other upstream 514150 11486191 ~ 11487884 (+) True G140693
TU176867 other upstream 789923 11209573 ~ 11212111 (+) True G140613
TU176681 other upstream 1245194 10754901 ~ 10756840 (+) True G140478
TU176317 other upstream 2221582 9778250 ~ 9780452 (+) True G140189
TU176137 other upstream 2671570 9325488 ~ 9330464 (+) True G140030
TU177209 other downstream 361950 12373966 ~ 12374360 (+) False AMCG00003129
TU177286 other downstream 718715 12730731 ~ 12739767 (+) True G140939
TU177338 other downstream 866669 12878685 ~ 12882998 (+) True AMCG00003141
TU177434 other downstream 1094440 13106456 ~ 13110634 (+) True AMCG00003158
TU177775 other downstream 2168764 14180780 ~ 14184643 (+) True G141331

Expression Profile