Gene
RNA
| Item | Value |
|---|---|
| RNA id | AMCG00003225 |
| length | 1215 |
| RNA type | mRNA |
| GC content | 0.47 |
| exon number | 11 |
| gene id | AMCG00003225 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030139.1 |
| NCBI id | CM030139.1 |
| chromosome length | 23121578 |
| location | 14976699 ~ 14987925 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | name | namespace |
|---|---|---|
| GO:0003676 | nucleic acid binding | molecular_function |
| GO:0000166 | nucleotide binding | molecular_function |
| id | description |
|---|---|
| K13201 | TIA1, TIAL1; nucleolysin TIA-1/TIAR |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU177863 | lncRNA | upstream | 460189 | 14462167 ~ 14516510 (+) | True | G141405 |
| TU177879 | lncRNA | upstream | 467860 | 14500971 ~ 14508839 (+) | True | G141412 |
| TU177856 | lncRNA | upstream | 531344 | 14443857 ~ 14445355 (+) | True | G141401 |
| TU177734 | lncRNA | upstream | 845424 | 14122783 ~ 14131275 (+) | True | AMCG00003182 |
| TU177719 | lncRNA | upstream | 923017 | 14053469 ~ 14053682 (+) | True | G141282 |
| TU178084 | lncRNA | downstream | 198146 | 15186071 ~ 15186325 (+) | True | G141573 |
| TU178085 | lncRNA | downstream | 202058 | 15189983 ~ 15190345 (+) | True | G141574 |
| TU178099 | lncRNA | downstream | 229317 | 15217242 ~ 15217551 (+) | True | G141582 |
| TU178111 | lncRNA | downstream | 264915 | 15252840 ~ 15254844 (+) | True | G141592 |
| TU178262 | lncRNA | downstream | 1503501 | 16491426 ~ 16500980 (+) | False | AMCG00003257 |
| AMCG00003221 | mRNA | upstream | 90239 | 14878748 ~ 14886460 (+) | True | AMCG00003221 |
| AMCG00003216 | mRNA | upstream | 149884 | 14808618 ~ 14826815 (+) | True | AMCG00003216 |
| AMCG00003217 | mRNA | upstream | 176477 | 14788125 ~ 14800222 (+) | True | AMCG00003217 |
| AMCG00003218 | mRNA | upstream | 211352 | 14737354 ~ 14765347 (+) | True | AMCG00003218 |
| AMCG00003209 | mRNA | upstream | 311136 | 14657397 ~ 14665563 (+) | True | AMCG00003209 |
| AMCG00003226 | mRNA | downstream | 5889 | 14993814 ~ 14999491 (+) | True | AMCG00003226 |
| AMCG00003224 | mRNA | downstream | 14885 | 15002810 ~ 15008216 (+) | True | AMCG00003224 |
| AMCG00003228 | mRNA | downstream | 48026 | 15035951 ~ 15039764 (+) | True | AMCG00003228 |
| AMCG00003230 | mRNA | downstream | 64417 | 15052342 ~ 15056226 (+) | True | AMCG00003230 |
| AMCG00003229 | mRNA | downstream | 147287 | 15135212 ~ 15146285 (+) | True | AMCG00003229 |
| TU177906 | other | upstream | 371262 | 14601317 ~ 14605437 (+) | False | AMCG00003207 |
| TU177803 | other | upstream | 687957 | 14287807 ~ 14288742 (+) | False | AMCG00003195 |
| TU177775 | other | upstream | 792056 | 14180780 ~ 14184643 (+) | True | G141331 |
| TU177434 | other | upstream | 1866065 | 13106456 ~ 13110634 (+) | True | AMCG00003158 |
| TU177338 | other | upstream | 2093701 | 12878685 ~ 12882998 (+) | True | AMCG00003141 |
| TU178303 | other | downstream | 1566086 | 16554011 ~ 16559206 (+) | False | AMCG00003256 |
| TU178585 | other | downstream | 2688354 | 17676279 ~ 17678522 (+) | True | G141962 |
| TU178734 | other | downstream | 3678842 | 18666767 ~ 18692204 (+) | False | G142078 |
| TU178857 | other | downstream | 4547768 | 19535693 ~ 19537091 (+) | True | G142172 |
| TU178898 | other | downstream | 4630956 | 19618881 ~ 19633073 (+) | False | AMCG00003323 |
