Gene
RNA
| Item | Value |
|---|---|
| RNA id | AMCG00003291 |
| length | 1014 |
| RNA type | mRNA |
| GC content | 0.38 |
| exon number | 3 |
| gene id | AMCG00003291 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030139.1 |
| NCBI id | CM030139.1 |
| chromosome length | 23121578 |
| location | 17721244 ~ 17725381 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | name | namespace |
|---|---|---|
| GO:0032402 | melanosome transport | biological_process |
| GO:0070121 | Kupffer's vesicle development | biological_process |
| GO:0034464 | BBSome | cellular_component |
| GO:0005929 | cilium | cellular_component |
| GO:0005737 | cytoplasm | cellular_component |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU178591 | lncRNA | upstream | 8380 | 17712660 ~ 17712864 (+) | True | G141966 |
| TU178590 | lncRNA | upstream | 17784 | 17703172 ~ 17703460 (+) | True | G141965 |
| TU178576 | lncRNA | upstream | 203323 | 17517720 ~ 17517921 (+) | True | G141955 |
| TU178473 | lncRNA | upstream | 686002 | 17032425 ~ 17035242 (+) | True | G141885 |
| TU178408 | lncRNA | upstream | 919932 | 16798959 ~ 16801312 (+) | True | G141829 |
| TU178636 | lncRNA | downstream | 113330 | 17838711 ~ 17840604 (+) | True | G141999 |
| TU178659 | lncRNA | downstream | 214480 | 17939861 ~ 18000435 (+) | True | G142014 |
| TU178715 | lncRNA | downstream | 769543 | 18494924 ~ 18496277 (+) | True | G142062 |
| TU178735 | lncRNA | downstream | 863193 | 18588574 ~ 18670509 (+) | True | G142078 |
| TU178740 | lncRNA | downstream | 1031532 | 18756913 ~ 18757187 (+) | True | G142083 |
| AMCG00003284 | mRNA | upstream | 318494 | 17377073 ~ 17402750 (+) | True | AMCG00003284 |
| AMCG00003282 | mRNA | upstream | 366365 | 17332334 ~ 17354879 (+) | True | AMCG00003282 |
| AMCG00003281 | mRNA | upstream | 410023 | 17306500 ~ 17311221 (+) | True | AMCG00003281 |
| AMCG00003265 | mRNA | upstream | 780137 | 16933521 ~ 16941107 (+) | True | AMCG00003265 |
| AMCG00003264 | mRNA | upstream | 790389 | 16914965 ~ 16930855 (+) | True | AMCG00003264 |
| AMCG00003295 | mRNA | downstream | 166842 | 17892223 ~ 17896705 (+) | True | AMCG00003295 |
| AMCG00003301 | mRNA | downstream | 315394 | 18040775 ~ 18059015 (+) | True | AMCG00003301 |
| AMCG00003302 | mRNA | downstream | 336055 | 18061436 ~ 18073141 (+) | True | AMCG00003302 |
| AMCG00003305 | mRNA | downstream | 580665 | 18306046 ~ 18339835 (+) | True | AMCG00003305 |
| AMCG00003306 | mRNA | downstream | 714126 | 18439507 ~ 18493790 (+) | True | AMCG00003306 |
| TU178585 | other | upstream | 42722 | 17676279 ~ 17678522 (+) | True | G141962 |
| TU178303 | other | upstream | 1162038 | 16554011 ~ 16559206 (+) | False | AMCG00003256 |
| TU177906 | other | upstream | 3115807 | 14601317 ~ 14605437 (+) | False | AMCG00003207 |
| TU177803 | other | upstream | 3432502 | 14287807 ~ 14288742 (+) | False | AMCG00003195 |
| TU177775 | other | upstream | 3536601 | 14180780 ~ 14184643 (+) | True | G141331 |
| TU178734 | other | downstream | 941386 | 18666767 ~ 18692204 (+) | False | G142078 |
| TU178857 | other | downstream | 1810312 | 19535693 ~ 19537091 (+) | True | G142172 |
| TU178898 | other | downstream | 1893500 | 19618881 ~ 19633073 (+) | False | AMCG00003323 |
