Gene
RNA
| Item | Value |
|---|---|
| RNA id | AMCG00003319 |
| length | 792 |
| RNA type | mRNA |
| GC content | 0.53 |
| exon number | 5 |
| gene id | AMCG00003319 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030139.1 |
| NCBI id | CM030139.1 |
| chromosome length | 23121578 |
| location | 19484791 ~ 19488202 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | description |
|---|---|
| K07603 | COL17A, BP180; collagen type XVII alpha |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU178747 | lncRNA | downstream | 647306 | 18835540 ~ 18837485 (-) | True | G142090 |
| TU178720 | lncRNA | downstream | 1178108 | 18306362 ~ 18306683 (-) | True | G142066 |
| TU178718 | lncRNA | downstream | 1179813 | 18304631 ~ 18304978 (-) | True | G142064 |
| TU178713 | lncRNA | downstream | 1197579 | 18287003 ~ 18287212 (-) | True | G142060 |
| TU178467 | lncRNA | downstream | 2546745 | 16937634 ~ 16938046 (-) | True | G141879 |
| TU178861 | lncRNA | upstream | 60439 | 19548641 ~ 19548932 (-) | True | G142176 |
| TU178890 | lncRNA | upstream | 109127 | 19597329 ~ 19599114 (-) | True | G142200 |
| TU179066 | lncRNA | upstream | 692593 | 20180795 ~ 20181023 (-) | True | G142348 |
| TU179075 | lncRNA | upstream | 887184 | 20375386 ~ 20375626 (-) | True | G142357 |
| TU179126 | lncRNA | upstream | 1166861 | 20655063 ~ 20669631 (-) | True | G142404 |
| AMCG00003317 | mRNA | downstream | 21926 | 19456531 ~ 19462865 (-) | True | AMCG00003317 |
| AMCG00003314 | mRNA | downstream | 69969 | 19402585 ~ 19414822 (-) | True | AMCG00003314 |
| AMCG00003313 | mRNA | downstream | 230074 | 19231811 ~ 19254717 (-) | True | AMCG00003313 |
| AMCG00003308 | mRNA | downstream | 355409 | 19120860 ~ 19129382 (-) | True | AMCG00003308 |
| AMCG00003309 | mRNA | downstream | 363942 | 19082351 ~ 19120849 (-) | True | AMCG00003309 |
| AMCG00003320 | mRNA | upstream | 55435 | 19543637 ~ 19569532 (-) | True | AMCG00003320 |
| AMCG00003318 | mRNA | upstream | 86723 | 19574925 ~ 19586023 (-) | True | AMCG00003318 |
| AMCG00003325 | mRNA | upstream | 145686 | 19633888 ~ 19654154 (-) | True | AMCG00003325 |
| AMCG00003326 | mRNA | upstream | 168463 | 19656665 ~ 19661649 (-) | True | AMCG00003326 |
| AMCG00003330 | mRNA | upstream | 211784 | 19699986 ~ 19706889 (-) | True | AMCG00003330 |
| TU178404 | other | downstream | 2736360 | 16748061 ~ 16748431 (-) | True | G141826 |
| TU178070 | other | downstream | 4367274 | 15081655 ~ 15117517 (-) | False | AMCG00003231 |
| TU178022 | other | downstream | 4810371 | 14669472 ~ 14674420 (-) | True | AMCG00003214 |
| TU177540 | other | downstream | 6054467 | 13427294 ~ 13430324 (-) | False | AMCG00003164 |
| TU178860 | other | upstream | 55446 | 19543648 ~ 19544684 (-) | False | AMCG00003320 |
| TU178862 | other | upstream | 64669 | 19552871 ~ 19554112 (-) | False | AMCG00003320 |
| TU178865 | other | upstream | 67241 | 19555443 ~ 19563278 (-) | False | AMCG00003320 |
| TU178867 | other | upstream | 77193 | 19565395 ~ 19566587 (-) | False | AMCG00003320 |
| TU178878 | other | upstream | 78711 | 19566913 ~ 19569615 (-) | False | AMCG00003320 |
