RNA id: AMCG00003334


Basic Information

Item Value
RNA id AMCG00003334
length 531
RNA type mRNA
GC content 0.57
exon number 4
gene id AMCG00003334
representative True

Chromosome Information

Item Value
chromosome id CM030139.1
NCBI id CM030139.1
chromosome length 23121578
location 19863773 ~ 19867810 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ATGTCCAATAAGCTCCCACCTGGAGCGAAGTGGTACTTGAGAGAGACCTCTGAAGGGGCTAGAAAGACTGGGCTGCCAGTGATCATCCtctcctgtttttctctctctgtcagctgCCAACAACTCCTTTGCCTGGGATCTGACTTCCGGAGGGGCGCTGGGGTCCTGGACATGGTCTTTGAGTCTCCGTCAACACTGCTCTCCTGTGGCTATGACACCTACATCCGTTACTGGGACCTCAGGGTCAGCTCAGGGAAGTGTGTCATGGAGTGGGAGGAGCCTCACGACAGTGCCCTGTACTGTGTCCAGAGCGACGGGAACCACATGATCGCCAGTGGCTCTTCCTACTATGGAGTTGTGAGGCTGTGGGACAAGCGGCAGAGCCATTGCTTACAGAccttctctctgtcctccccGACCAGCAGCCCAGTGTATTGCCTGCGCTTCAACACCACCCATCTGTTTGCCGCCCTGGCCTCTGCTCTCTACGCACTGGATTTCAAAGCCCCCGAACTGCGGGGCAGGAAGTGA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU178890 lncRNA downstream 264659 19597329 ~ 19599114 (-) True G142200
TU178861 lncRNA downstream 314841 19548641 ~ 19548932 (-) True G142176
TU178747 lncRNA downstream 1026288 18835540 ~ 18837485 (-) True G142090
TU178720 lncRNA downstream 1557090 18306362 ~ 18306683 (-) True G142066
TU178718 lncRNA downstream 1558795 18304631 ~ 18304978 (-) True G142064
TU179066 lncRNA upstream 312985 20180795 ~ 20181023 (-) True G142348
TU179075 lncRNA upstream 507576 20375386 ~ 20375626 (-) True G142357
TU179126 lncRNA upstream 787253 20655063 ~ 20669631 (-) True G142404
TU179128 lncRNA upstream 791802 20659612 ~ 20743604 (-) True G142406
TU179139 lncRNA upstream 890309 20758119 ~ 20758457 (-) True G142417
AMCG00003333 mRNA downstream 6907 19850325 ~ 19856866 (-) True AMCG00003333
AMCG00003335 mRNA downstream 16374 19829188 ~ 19847399 (-) True AMCG00003335
AMCG00003337 mRNA downstream 43140 19802079 ~ 19820633 (-) True AMCG00003337
AMCG00003336 mRNA downstream 101479 19747426 ~ 19762294 (-) True AMCG00003336
AMCG00003330 mRNA downstream 156884 19699986 ~ 19706889 (-) True AMCG00003330
AMCG00003338 mRNA upstream 27501 19895311 ~ 19900232 (-) True AMCG00003338
AMCG00003339 mRNA upstream 42466 19910276 ~ 19929271 (-) True AMCG00003339
AMCG00003342 mRNA upstream 127209 19995019 ~ 20005313 (-) True AMCG00003342
AMCG00003341 mRNA upstream 152048 20019858 ~ 20033589 (-) True AMCG00003341
AMCG00003344 mRNA upstream 291518 20159328 ~ 20165583 (-) True AMCG00003344
TU178878 other downstream 294158 19566913 ~ 19569615 (-) False AMCG00003320
TU178867 other downstream 297186 19565395 ~ 19566587 (-) False AMCG00003320
TU178865 other downstream 300495 19555443 ~ 19563278 (-) False AMCG00003320
TU178862 other downstream 309661 19552871 ~ 19554112 (-) False AMCG00003320
TU178860 other downstream 319089 19543648 ~ 19544684 (-) False AMCG00003320

Expression Profile