RNA id: AMCG00003349



Basic Information


Item Value
RNA id AMCG00003349
length 294
RNA type mRNA
GC content 0.51
exon number 4
gene id AMCG00003349
representative True

Chromosome Information


Item Value
chromosome id CM030139.1
NCBI id CM030139.1
chromosome length 23121578
location 20403696 ~ 20408684 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


ATGGGACTTGGGGGGGAAATGGTTATACAGCTGAAAACCACTTCggggaaggaggagaggagtgGAGGGGAGGGgGAGCTGAATGGAAATAACATCACGCGCATCAACAAGAATGACTTTTCTGGACTGAAGTACCTCAGAGTCTTGCAGTTGATGGAAAACCAGATTGGGACCATCGAGAGAGGAGCTTTTGATGACAtgaaggagctggagagactTCGGCTGAATCGTAACCAGCTTCACCAGCTTCCGGAGCTGCTGTTCCAGAAGAATGCTGCTCTCTCCCGACTGTGA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU179072 lncRNA upstream 129080 20274333 ~ 20274616 (+) True G142354
TU179058 lncRNA upstream 274981 20128367 ~ 20128715 (+) True G142340
TU178921 lncRNA upstream 747541 19654366 ~ 19656155 (+) False AMCG00003324
TU178899 lncRNA upstream 770623 19618881 ~ 19633073 (+) True AMCG00003323
TU178895 lncRNA upstream 787129 19616261 ~ 19616567 (+) True G142205
TU179095 lncRNA downstream 186786 20595470 ~ 20599545 (+) True G142376
TU179118 lncRNA downstream 235797 20644481 ~ 20644794 (+) True G142397
TU179134 lncRNA downstream 336861 20745545 ~ 20749364 (+) True G142412
TU179141 lncRNA downstream 358670 20767354 ~ 20771779 (+) True G142419
TU179142 lncRNA downstream 359340 20768024 ~ 20771779 (+) False G142419
AMCG00003343 mRNA upstream 276140 20126144 ~ 20127556 (+) True AMCG00003343
AMCG00003340 mRNA upstream 425781 19955769 ~ 19977915 (+) True AMCG00003340
AMCG00003331 mRNA upstream 541055 19857380 ~ 19862641 (+) True AMCG00003331
AMCG00003332 mRNA upstream 580651 19819018 ~ 19823045 (+) True AMCG00003332
AMCG00003327 mRNA upstream 662616 19728276 ~ 19741080 (+) True AMCG00003327
AMCG00003348 mRNA downstream 83675 20492359 ~ 20593500 (+) True AMCG00003348
AMCG00003351 mRNA downstream 351636 20760320 ~ 20764685 (+) True AMCG00003351
AMCG00003359 mRNA downstream 743167 21151851 ~ 21177530 (+) True AMCG00003359
AMCG00003361 mRNA downstream 1116953 21525637 ~ 21748601 (+) True AMCG00003361
AMCG00003363 mRNA downstream 1344662 21753346 ~ 21755934 (+) True AMCG00003363
TU178898 other upstream 770623 19618881 ~ 19633073 (+) False AMCG00003323
TU178857 other upstream 866605 19535693 ~ 19537091 (+) True G142172
TU178734 other upstream 1711492 18666767 ~ 18692204 (+) False G142078
TU178585 other upstream 2725174 17676279 ~ 17678522 (+) True G141962
TU178303 other upstream 3844490 16554011 ~ 16559206 (+) False AMCG00003256

Expression Profile