RNA id: AMCG00003351



Basic Information


Item Value
RNA id AMCG00003351
length 390
RNA type mRNA
GC content 0.51
exon number 3
gene id AMCG00003351
representative True

Chromosome Information


Item Value
chromosome id CM030139.1
NCBI id CM030139.1
chromosome length 23121578
location 20760320 ~ 20764685 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


ATGTTTACTTTTGCAGGTCGAAGACATGGTTTAGGACAGTTAAAGTTCTCAGATGGTACATGCTATACAGGACAGTTTGAGAATGGCTTGTTCAATGGCTGTGGGGTTCTTGTCTTTCCAGATGGATCGAGGTATGAAGGGGATTTTGTCCAGGGGAAGTTTCAAGGTGTGGGAGTCTTCATTCGATTCGATGGTATGAAGTTTGAAGGGGAGTTCAAAGGTGGACGTGTGGAAGGATAtgGGTTACTGACCTTCCCTGATGGCGCCCATGGGGTGCCCCGCAACGAGGGCGTGTTTGAAAACAACCGTCTGCTGAGATGCGAGAAGTGTCAGGCAGTGATCCAGAGGGCACAGGGCTCAGCTGCCACGGCTCGCAGTCTCTCCGTATGA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU179134 lncRNA upstream 10956 20745545 ~ 20749364 (+) True G142412
TU179118 lncRNA upstream 115526 20644481 ~ 20644794 (+) True G142397
TU179095 lncRNA upstream 160775 20595470 ~ 20599545 (+) True G142376
TU179072 lncRNA upstream 485704 20274333 ~ 20274616 (+) True G142354
TU179058 lncRNA upstream 631605 20128367 ~ 20128715 (+) True G142340
TU179141 lncRNA downstream 2669 20767354 ~ 20771779 (+) True G142419
TU179142 lncRNA downstream 3339 20768024 ~ 20771779 (+) False G142419
TU179214 lncRNA downstream 339135 21103820 ~ 21143131 (+) True G142482
TU179313 lncRNA downstream 809429 21574114 ~ 21659778 (+) True G142556
TU179331 lncRNA downstream 1001656 21766341 ~ 21766544 (+) True G142572
AMCG00003348 mRNA upstream 166820 20492359 ~ 20593500 (+) True AMCG00003348
AMCG00003349 mRNA upstream 351636 20403696 ~ 20408684 (+) True AMCG00003349
AMCG00003343 mRNA upstream 632764 20126144 ~ 20127556 (+) True AMCG00003343
AMCG00003340 mRNA upstream 782405 19955769 ~ 19977915 (+) True AMCG00003340
AMCG00003331 mRNA upstream 897679 19857380 ~ 19862641 (+) True AMCG00003331
AMCG00003359 mRNA downstream 387166 21151851 ~ 21177530 (+) True AMCG00003359
AMCG00003361 mRNA downstream 760952 21525637 ~ 21748601 (+) True AMCG00003361
AMCG00003363 mRNA downstream 988661 21753346 ~ 21755934 (+) True AMCG00003363
AMCG00003370 mRNA downstream 1281628 22046313 ~ 22067314 (+) True AMCG00003370
AMCG00003371 mRNA downstream 1370216 22134901 ~ 22144437 (+) True AMCG00003371
TU178898 other upstream 1127247 19618881 ~ 19633073 (+) False AMCG00003323
TU178857 other upstream 1223229 19535693 ~ 19537091 (+) True G142172
TU178734 other upstream 2068116 18666767 ~ 18692204 (+) False G142078
TU178585 other upstream 3081798 17676279 ~ 17678522 (+) True G141962
TU178303 other upstream 4201114 16554011 ~ 16559206 (+) False AMCG00003256

Expression Profile