RNA id: AMCG00003372



Basic Information


Item Value
RNA id AMCG00003372
length 468
RNA type mRNA
GC content 0.46
exon number 7
gene id AMCG00003372
representative True

Chromosome Information


Item Value
chromosome id CM030139.1
NCBI id CM030139.1
chromosome length 23121578
location 22323832 ~ 22487911 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


ATGTTTGCAAAGGGGAAGCtgaagaggaaggaggaggagaagaggaagaagaagaggaagaggaggaagaatacatcttctttaaaaaaatactgcatgGAGTTTAGTTCTGTCCTGCTGGGAGCAGCCATTGAGAGAGGAAGCACAGTTGCAAGGTCAAGATTGCATCGGGCCCAACCGGGCGCCTCTGGGAAGGTTTTAGGACTCCGGAATAGCCTTGATTATTTTATACTGgcTGGGTTAAAGGAACGAAGCAACCCTCTGAATAATGCGATTGATAACATGTGCAAGAAGACAAGAGACCTTCGCAGAcaacTCAGAAAGGCGATCATAGATCACATCTCGGACTCCTTCCTGGACACCACTGTCCCACTTCTGGTCCTCATTGAAGCAGctaaaaagggaaaagaaaaggaaatcaaaGAATATGCAGCTATATTTAGAGAACATGCCAACAAGCTGGTGGAG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU179464 lncRNA upstream 229084 22091701 ~ 22094748 (+) True G142664
TU179384 lncRNA upstream 329158 21991512 ~ 21994674 (+) False G142620
TU179383 lncRNA upstream 329158 21992414 ~ 21994674 (+) True G142620
TU179340 lncRNA upstream 517172 21801019 ~ 21806660 (+) True G142580
TU179331 lncRNA upstream 557288 21766341 ~ 21766544 (+) True G142572
TU179494 lncRNA downstream 161029 22648940 ~ 22706530 (+) True G142690
TU179529 lncRNA downstream 312941 22800852 ~ 22801060 (+) True G142722
TU179531 lncRNA downstream 340190 22828101 ~ 22828463 (+) True G142724
TU179534 lncRNA downstream 405937 22893848 ~ 22894101 (+) True G142727
TU179536 lncRNA downstream 406284 22894195 ~ 22894481 (+) True G142729
AMCG00003371 mRNA upstream 179395 22134901 ~ 22144437 (+) True AMCG00003371
AMCG00003370 mRNA upstream 256518 22046313 ~ 22067314 (+) True AMCG00003370
AMCG00003363 mRNA upstream 567898 21753346 ~ 21755934 (+) True AMCG00003363
AMCG00003361 mRNA upstream 575231 21525637 ~ 21748601 (+) True AMCG00003361
AMCG00003359 mRNA upstream 1146302 21151851 ~ 21177530 (+) True AMCG00003359
AMCG00003374 mRNA downstream 223981 22711892 ~ 22716708 (+) True AMCG00003374
TU178898 other upstream 2690759 19618881 ~ 19633073 (+) False AMCG00003323
TU178857 other upstream 2786741 19535693 ~ 19537091 (+) True G142172
TU178734 other upstream 3631628 18666767 ~ 18692204 (+) False G142078
TU178585 other upstream 4645310 17676279 ~ 17678522 (+) True G141962
TU178303 other upstream 5764626 16554011 ~ 16559206 (+) False AMCG00003256

Expression Profile