RNA id: AMCG00003373


Basic Information

Item Value
RNA id AMCG00003373
length 1209
RNA type mRNA
GC content 0.44
exon number 2
gene id AMCG00003373
representative True

Chromosome Information

Item Value
chromosome id CM030139.1
NCBI id CM030139.1
chromosome length 23121578
location 22104127 ~ 22108082 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ATGGTTTCTCTCTGCATCAACCAGTCTCTAGTGCTGAACTTGGACATTCAAAAGAATATGACGCGTGAAAATCAAGATCCAGGAGGAACAACAAGCAGGAAGAGGGCGATTCTTTTGAGTTTCACTCTTGGAGTGTTTATTCTGTTTGCTGTCATAGGAAACATCCTGGTCATCCTCGCCGTCGCTTGTGACAGACATCTCCGAGTAGTTACTAACTACTTCATCATGAACTTGGCTGTGGCAGACTTGTTACTCAGTACCGCCGTACTCCCTTTTTCTGCGTCCCTTGAAGCTCTGGGCTACTGGGTTTTCGGACGCGTGTTCTGTAACATCTGGGCAGCGGTGGACGTCCTGTGCTGCACAGCTTCCATTCTAAGCCTCTGCCTTATCTCAGTAGACAGATATATTGGCGTGAGTTATCCTTTGAGATACCCGTCGATTATGACTCAAAGGAGAGGCTTCATCACTTTGGCAGGGGTCTGGGTGCTCGCCATAGTTATATCGATCGGTCCGCTTCTGGGGTGGAAGGAACCACATCCTGAGGACGAGAACATCTGCAAGATCACAGAAGAGCCGGGTTATGCCCTGTTCTCTGCGCTAGGGTCTTTTTACGTGCCCTTGGTAGTTATTCTGCTTATGTATTTTCGCGTTTATCTGGCGGCAAAGAGAGAGATCAGATGTTTGTGCTCAGGGACAAAGCGAGAGACACTTGGATCTACAGAAGAAGTCACTTTAAGGATTCATAGAAAGATTTCTACACGGGACAGCAGCTTCAGTAGATCAAATCCGCAGTCCAAAAACAGAAGTCTCAGAAGTTCGCTTTCTTTAAGGATTCAGAAGttttccaaagaaaaaaaggcCGCAAAAACGCTGGGTGTAGTAGTTGGTGGTTTCATTCTCTGCTGGCTCCCTTTTTTCGTTGTTcttcctttagGATCCTTCTACCCTCAGTACAAACCTCCTGAAGCtttgtttaaagtaattttttGGCTGGGTTACTTCAATAGCTGCATTAATCCAATTATATACCCTTGTTTCAGCCAAGATTTCAAAAGAGCTTTTAAAAGGATCCTGAGGGGTCAGTttggaagaaagaagaaaacatttcttgCCCTGCATCACTTTTCATATAAGTCCAGCAGGAAAACAACCATAAGCATCCTTGACTGTGAGCAAAGTAAAGacaacaaacaatacaattctGATCAA

Function

GO: NA

KEGG:

id description
K22790 Octbeta; octopamine receptor beta

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU179466 lncRNA downstream 9499 22091701 ~ 22094628 (-) True G142665
TU179463 lncRNA downstream 18936 22084918 ~ 22085191 (-) True G142663
TU179460 lncRNA downstream 34145 22066953 ~ 22069982 (-) True G142661
TU179329 lncRNA downstream 341869 21762012 ~ 21762258 (-) True G142570
TU179305 lncRNA downstream 644894 21451675 ~ 21459233 (-) True G142549
TU179515 lncRNA upstream 594500 22702582 ~ 22706511 (-) True G142709
TU179532 lncRNA upstream 719990 22828072 ~ 22828460 (-) True G142725
AMCG00003367 mRNA downstream 84113 21994244 ~ 22020014 (-) True AMCG00003367
AMCG00003365 mRNA downstream 113707 21968705 ~ 21990420 (-) True AMCG00003365
AMCG00003366 mRNA downstream 237542 21818186 ~ 21866585 (-) True AMCG00003366
AMCG00003369 mRNA downstream 289343 21801030 ~ 21814784 (-) True AMCG00003369
AMCG00003368 mRNA downstream 328679 21766960 ~ 21775448 (-) True AMCG00003368
AMCG00003375 mRNA upstream 724107 22832189 ~ 22833510 (-) True AMCG00003375
AMCG00003377 mRNA upstream 872418 22980500 ~ 22985638 (-) True AMCG00003377
AMCG00003376 mRNA upstream 877590 22985672 ~ 22986067 (-) True AMCG00003376
TU179004 other downstream 2227365 19814142 ~ 19876762 (-) False AMCG00003337
TU178878 other downstream 2534512 19566913 ~ 19569615 (-) False AMCG00003320
TU178867 other downstream 2537540 19565395 ~ 19566587 (-) False AMCG00003320
TU178865 other downstream 2540849 19555443 ~ 19563278 (-) False AMCG00003320
TU178862 other downstream 2550015 19552871 ~ 19554112 (-) False AMCG00003320

Expression Profile