RNA id: TU174874


Basic Information

Item Value
RNA id TU174874
length 231
lncRNA type inter_gene
GC content 0.48
exon number 2
gene id G139029
representative True

Chromosome Information

Item Value
chromosome id CM030139.1
NCBI id CM030139.1
chromosome length 23121578
location 4507504 ~ 4511307 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ATTTAATTCGATTGATGCCTCCAGCGAATACTGCGAAGGTTAGGGCAGTGTGGAAACAAAAGTTGAGGAGCATGTGCCAGCCCTTTCTACTAATGCGGATTGTGCTACCTGTGGTGCACAATGTAGGTAATAATTGATGCAAAGAGGCACAATAACATCACAGCCGTACAGGCATAGACAACAGGGTGGAGGAACTCCCCTGGATAAGGGGGGAAGGACAGCACTTTCTTC

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU174873 lncRNA downstream 11142 4496162 ~ 4496362 (-) True G139028
TU174872 lncRNA downstream 12086 4495028 ~ 4495418 (-) True G139027
TU174871 lncRNA downstream 30841 4476464 ~ 4476663 (-) True G139026
TU174870 lncRNA downstream 41315 4465954 ~ 4466189 (-) True G139025
TU174869 lncRNA downstream 51502 4455792 ~ 4456002 (-) True G139024
TU174884 lncRNA upstream 72558 4583865 ~ 4584172 (-) True G139039
TU175135 lncRNA upstream 885032 5396339 ~ 5396559 (-) True G139249
TU175433 lncRNA upstream 1646436 6157743 ~ 6158763 (-) True G139496
TU175564 lncRNA upstream 1970960 6482267 ~ 6510125 (-) True G139593
TU175618 lncRNA upstream 2490358 7001665 ~ 7073536 (-) True G139639
AMCG00002843 mRNA downstream 170578 4306326 ~ 4336926 (-) True AMCG00002843
AMCG00002844 mRNA downstream 209168 4282762 ~ 4298336 (-) True AMCG00002844
AMCG00002841 mRNA downstream 286443 4219176 ~ 4221061 (-) True AMCG00002841
AMCG00002838 mRNA downstream 471624 4034370 ~ 4035880 (-) True AMCG00002838
AMCG00002836 mRNA downstream 477509 4022581 ~ 4029995 (-) True AMCG00002836
AMCG00002851 mRNA upstream 71275 4582582 ~ 4600633 (-) True AMCG00002851
AMCG00002854 mRNA upstream 167400 4678707 ~ 4714306 (-) True AMCG00002854
AMCG00002855 mRNA upstream 235440 4746747 ~ 4750268 (-) True AMCG00002855
AMCG00002856 mRNA upstream 239298 4750605 ~ 4754918 (-) True AMCG00002856
AMCG00002859 mRNA upstream 287280 4798587 ~ 4826031 (-) True AMCG00002859
TU174755 other downstream 504700 4001650 ~ 4002804 (-) True G138932
TU174734 other downstream 557336 3937764 ~ 3950168 (-) False AMCG00002828
TU174506 other downstream 1788085 2718208 ~ 2719419 (-) True G138741
TU174137 other downstream 3582106 923010 ~ 925398 (-) False AMCG00002752
TU174136 other downstream 3583270 923010 ~ 924234 (-) False AMCG00002752
TU175621 other upstream 2551166 7062473 ~ 7066321 (-) True AMCG00002935
TU175710 other upstream 2837504 7348811 ~ 7352821 (-) True AMCG00002945
TU175851 other upstream 3419950 7931257 ~ 7938241 (-) False AMCG00002970
TU176000 other upstream 3974054 8485361 ~ 8494596 (-) True G139933
TU176103 other upstream 4335725 8847032 ~ 8847840 (-) True G140006

Expression Profile