RNA id: TU175655



Basic Information


Item Value
RNA id TU175655
length 324
lncRNA type inter_gene
GC content 0.44
exon number 1
gene id G139668
representative True

Chromosome Information


Item Value
chromosome id CM030139.1
NCBI id CM030139.1
chromosome length 23121578
location 7218869 ~ 7219192 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


TTGACTATATATgtgtcttcctgagcagttgtcaggcagaaaccgaacttccactcatcacgggacagacatgtgggtcctgttatctttctctcctgtctggtctgcataaaagtgcctgtagtttgtaacttctctaagactgttcttgagattgcctcttgaacctctttcATGCAGCTGCTTGTGTGAATAAACTTCTCTGAACATTGCATTCTACTCTCTCAGTCTGACTTATCGAAGGGAAACTCCTGATCAATCAAAGTAATCGATCTCTACAATTGTTTCCTCTGTTtccacctcacacacacacacacaccctcc

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU175618 lncRNA downstream 145333 7001665 ~ 7073536 (-) True G139639
TU175564 lncRNA downstream 708744 6482267 ~ 6510125 (-) True G139593
TU175433 lncRNA downstream 1060106 6157743 ~ 6158763 (-) True G139496
TU175135 lncRNA downstream 1822310 5396339 ~ 5396559 (-) True G139249
TU174884 lncRNA downstream 2634697 4583865 ~ 4584172 (-) True G139039
TU175760 lncRNA upstream 236352 7455544 ~ 7458491 (-) True G139752
TU175854 lncRNA upstream 726860 7946052 ~ 7946521 (-) True G139825
TU175906 lncRNA upstream 891833 8111025 ~ 8115245 (-) True G139867
TU175922 lncRNA upstream 962098 8181290 ~ 8181576 (-) True G139881
TU175946 lncRNA upstream 1011177 8230369 ~ 8231218 (-) False G139902
AMCG00002941 mRNA downstream 20880 7189337 ~ 7197989 (-) True AMCG00002941
AMCG00002936 mRNA downstream 137246 7077934 ~ 7081623 (-) True AMCG00002936
AMCG00002935 mRNA downstream 152519 7062561 ~ 7066350 (-) False AMCG00002935
AMCG00002934 mRNA downstream 158981 7040280 ~ 7059888 (-) True AMCG00002934
AMCG00002933 mRNA downstream 462078 6743734 ~ 6756791 (-) True AMCG00002933
AMCG00002945 mRNA upstream 129851 7349043 ~ 7350768 (-) False AMCG00002945
AMCG00002948 mRNA upstream 143860 7363052 ~ 7371613 (-) True AMCG00002948
AMCG00002947 mRNA upstream 183389 7402581 ~ 7407518 (-) True AMCG00002947
AMCG00002951 mRNA upstream 215059 7434251 ~ 7446572 (-) True AMCG00002951
AMCG00002950 mRNA upstream 240740 7459932 ~ 7468014 (-) True AMCG00002950
TU175621 other downstream 152548 7062473 ~ 7066321 (-) True AMCG00002935
TU174755 other downstream 3216065 4001650 ~ 4002804 (-) True G138932
TU174734 other downstream 3268701 3937764 ~ 3950168 (-) False AMCG00002828
TU174506 other downstream 4499450 2718208 ~ 2719419 (-) True G138741
TU174137 other downstream 6293471 923010 ~ 925398 (-) False AMCG00002752
TU175710 other upstream 129619 7348811 ~ 7352821 (-) True AMCG00002945
TU175851 other upstream 712065 7931257 ~ 7938241 (-) False AMCG00002970
TU176000 other upstream 1266169 8485361 ~ 8494596 (-) True G139933
TU176103 other upstream 1627840 8847032 ~ 8847840 (-) True G140006
TU176114 other upstream 2017466 9236658 ~ 9237730 (-) True G140015

Expression Profile