Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU176318 |
| length | 735 |
| lncRNA type | inter_gene |
| GC content | 0.35 |
| exon number | 4 |
| gene id | G140190 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030139.1 |
| NCBI id | CM030139.1 |
| chromosome length | 23121578 |
| location | 9781934 ~ 9785792 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | description |
|---|---|
| ko04612 | Antigen processing and presentation |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU176316 | lncRNA | upstream | 8869 | 9767086 ~ 9773065 (+) | True | G140188 |
| TU176280 | lncRNA | upstream | 51071 | 9730648 ~ 9730863 (+) | True | G140156 |
| TU176111 | lncRNA | upstream | 538092 | 9243131 ~ 9243842 (+) | False | AMCG00002996 |
| TU176097 | lncRNA | upstream | 635362 | 9146301 ~ 9146572 (+) | True | G140002 |
| TU176094 | lncRNA | upstream | 821509 | 8958739 ~ 8960425 (+) | True | G139999 |
| TU176320 | lncRNA | downstream | 1955 | 9787747 ~ 9788069 (+) | True | G140192 |
| TU176343 | lncRNA | downstream | 59092 | 9844884 ~ 9853426 (+) | False | AMCG00003019 |
| TU176344 | lncRNA | downstream | 59092 | 9844884 ~ 9853426 (+) | False | AMCG00003019 |
| TU176356 | lncRNA | downstream | 153064 | 9938856 ~ 9960116 (+) | True | G140223 |
| TU176389 | lncRNA | downstream | 193440 | 9979232 ~ 9979445 (+) | True | G140250 |
| AMCG00003018 | mRNA | upstream | 39095 | 9742438 ~ 9742839 (+) | True | AMCG00003018 |
| AMCG00003007 | mRNA | upstream | 148576 | 9629812 ~ 9633358 (+) | True | AMCG00003007 |
| AMCG00003009 | mRNA | upstream | 198049 | 9579599 ~ 9583885 (+) | True | AMCG00003009 |
| AMCG00003008 | mRNA | upstream | 206299 | 9562280 ~ 9575635 (+) | True | AMCG00003008 |
| AMCG00003002 | mRNA | upstream | 273637 | 9494051 ~ 9508297 (+) | True | AMCG00003002 |
| AMCG00003019 | mRNA | downstream | 58984 | 9844776 ~ 9853453 (+) | True | AMCG00003019 |
| AMCG00003020 | mRNA | downstream | 115475 | 9901267 ~ 9920544 (+) | True | AMCG00003020 |
| AMCG00003023 | mRNA | downstream | 137889 | 9923681 ~ 9926024 (+) | True | AMCG00003023 |
| AMCG00003024 | mRNA | downstream | 143647 | 9929439 ~ 9937381 (+) | True | AMCG00003024 |
| AMCG00003026 | mRNA | downstream | 180164 | 9965956 ~ 9976662 (+) | True | AMCG00003026 |
| TU176317 | other | upstream | 1482 | 9778250 ~ 9780452 (+) | True | G140189 |
| TU176137 | other | upstream | 451470 | 9325488 ~ 9330464 (+) | True | G140030 |
| TU176130 | other | upstream | 477094 | 9301612 ~ 9304840 (+) | True | AMCG00002998 |
| TU175890 | other | upstream | 1737714 | 8037577 ~ 8044220 (+) | True | AMCG00002965 |
| TU175799 | other | upstream | 1855102 | 7923182 ~ 7926832 (+) | True | G139784 |
| TU176681 | other | downstream | 969109 | 10754901 ~ 10756840 (+) | True | G140478 |
| TU176867 | other | downstream | 1423781 | 11209573 ~ 11212111 (+) | True | G140613 |
| TU176980 | other | downstream | 1700399 | 11486191 ~ 11487884 (+) | True | G140693 |
| TU177209 | other | downstream | 2588174 | 12373966 ~ 12374360 (+) | False | AMCG00003129 |
| TU177286 | other | downstream | 2944939 | 12730731 ~ 12739767 (+) | True | G140939 |
