RNA id: TU177825



Basic Information


Item Value
RNA id TU177825
length 203
lncRNA type inter_gene
GC content 0.48
exon number 1
gene id G141372
representative True

Chromosome Information


Item Value
chromosome id CM030139.1
NCBI id CM030139.1
chromosome length 23121578
location 14373967 ~ 14374169 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


GTCCCATTCACAAGTCTCGCCCTGCCTCTAAATTCATGAGTTGACTCATGGATGCCCCCTTGATCAGAAATGAAAAGACAGAAACTTACCTGAATCCAGTACCCTTCACAACGTTCTCCAGAGAGATCTTGGCCAGCCTGCCTACAACACATGTTCTTAGGCAAGTGAAGCAGAGGGCTGTCTCTTTTAAATACCACTCcccc

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU177763 lncRNA downstream 242901 14124884 ~ 14131066 (-) True G141319
TU177747 lncRNA downstream 309796 14063800 ~ 14064171 (-) True G141305
TU177746 lncRNA downstream 310441 14063172 ~ 14063526 (-) True G141304
TU177696 lncRNA downstream 402001 13971767 ~ 13971966 (-) True G141261
TU177695 lncRNA downstream 436258 13935284 ~ 13937709 (-) True G141260
TU177827 lncRNA upstream 3480 14377649 ~ 14378313 (-) True G141374
TU177857 lncRNA upstream 69662 14443831 ~ 14446505 (-) True G141402
TU178011 lncRNA upstream 256243 14630412 ~ 14669084 (-) True G141517
TU178020 lncRNA upstream 285250 14659419 ~ 14659991 (-) True G141520
TU178079 lncRNA upstream 779847 15154016 ~ 15154370 (-) True G141569
AMCG00003192 mRNA downstream 6744 14341770 ~ 14367223 (-) True AMCG00003192
AMCG00003194 mRNA downstream 68388 14290195 ~ 14305579 (-) True AMCG00003194
AMCG00003193 mRNA downstream 87622 14283405 ~ 14286345 (-) True AMCG00003193
AMCG00003190 mRNA downstream 103799 14260867 ~ 14270168 (-) True AMCG00003190
AMCG00003189 mRNA downstream 185740 14180691 ~ 14188227 (-) True AMCG00003189
AMCG00003196 mRNA upstream 10926 14385095 ~ 14385715 (-) True AMCG00003196
AMCG00003201 mRNA upstream 31292 14405461 ~ 14411926 (-) True AMCG00003201
AMCG00003200 mRNA upstream 98175 14472344 ~ 14479936 (-) True AMCG00003200
AMCG00003205 mRNA upstream 116615 14490784 ~ 14496042 (-) True AMCG00003205
AMCG00003206 mRNA upstream 125124 14499293 ~ 14512805 (-) True AMCG00003206
TU177540 other downstream 943643 13427294 ~ 13430324 (-) False AMCG00003164
TU177541 other downstream 943643 13427294 ~ 13430324 (-) False AMCG00003164
TU177373 other downstream 1494546 12861426 ~ 12879421 (-) True G141004
TU177332 other downstream 1518626 12851021 ~ 12855341 (-) False AMCG00003144
TU178022 other upstream 295303 14669472 ~ 14674420 (-) True AMCG00003214
TU178070 other upstream 707486 15081655 ~ 15117517 (-) False AMCG00003231
TU178404 other upstream 2373892 16748061 ~ 16748431 (-) True G141826
TU178860 other upstream 5169479 19543648 ~ 19544684 (-) False AMCG00003320
TU178862 other upstream 5178702 19552871 ~ 19554112 (-) False AMCG00003320

Expression Profile